Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03618 ATGAAACCAAGATTTGATCTGGAATTGGAGGCCTCAGCAGCAGAATATGAATCTGAAGTTAGCAGCCAGGTTGCTTCCAACATATCCTCTCTTCAAGAAACCTCTGCAGGCCCTTCAACTGACACCTTAACCAACTCTTACAAACTCGCGAATCCAATGGAGTTCGATGCTCTCTCGCTTGATTTAACTCTCAGCTTTGGCAACAATGAAACAGGGGAAAAAGCAGGGGATTCAATAGGACTCTCATTCTCTAGCACTAGTGAAAGCAGCAATGAACCAACTTTCCAAACTGGCACTGTACCAAGAGTCTTCTCTTGCAATTACTGCCAGCGCAAATTTTTCAGCTCGCAGGCTCTTGGAGGCCACCAGAACGCGCACAAGAGGGAGCGAACGCTGGCAAAGCGTGCCATGCGAATGGGGCTATTCTCTGAGAGGTATGCTAGTTTAGCATCTCTGCCTCTTCACGGTTCTTTCAGATCCCTGGGGATTAAGGCACACTCTTCAGTTCATCACCAAGCATTTGCACCATCAATTAGGCCTCCTGAGATAAAAACAAATGCAAGATTCGACCAAGGTTATGTCGGCCTTCCAATATTCTTGGAGGATGATGAGTCAGAACTGCTCTGGCCTGGTAGTTTCCGGCAGGTTACTAGCGAAGGAGGCGATAGCAATCAGGCATTCGTGCTGGCCAGGAGTTCGAATTTGAGTTTTACTGAGTTTATCAAGAGAGACATGCATGGAAGGGCTAAGAGTTTCAGATTGGATAGTTATATTTGCTTGGTCTCATGTATAACTTTCTTCGTTCAGTATTCTCTTAAGAATTCTTGA 828 0.4565 MKPRFDLELEASAAEYESEVSSQVASNISSLQETSAGPSTDTLTNSYKLANPMEFDALSLDLTLSFGNNETGEKAGDSIGLSFSSTSESSNEPTFQTGTVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGLFSERYASLASLPLHGSFRSLGIKAHSSVHHQAFAPSIRPPEIKTNARFDQGYVGLPIFLEDDESELLWPGSFRQVTSEGGDSNQAFVLARSSNLSFTEFIKRDMHGRAKSFRLDSYICLVSCITFFVQYSLKNS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03618 275 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Adu03g03618 275 MobiDBLite consensus disorder prediction 77 96 - -
Adu03g03618 275 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Adu03g03618 275 SUPERFAMILY beta-beta-alpha zinc fingers 102 131 IPR036236 -
Adu03g03618 275 PANTHER ZINC FINGER PROTEIN JAGGED 1 241 IPR045320 GO:0003700
Adu03g03618 275 MobiDBLite consensus disorder prediction 78 96 - -
Adu03g03618 275 PANTHER ZINC FINGER PROTEIN 3-RELATED 1 241 - -
Adu03g03618 275 Gene3D Classic Zinc Finger 84 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03618 Adu-Chr3 124290628 124291584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03618 102 224 C2H2 Transcription Factor Family AT1G66140 56.667 2.35e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu03g03618 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03618 - - gmx:100794851 318.931