Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03612 ATGAGTTCTTCTTCGTCTAACCAAGTGGCCAAGGCTAAGAAAGTGAAGAAAGCTCTTCAGCCGGAGTGGCTTAAGTCTCTTCTGAAAAGGACTTTCTTTGAATCTTCCTGTGCAACTCATCCTGTGCTTAAGAATGAGTTAAACCAATACTGTGTAACCTGTACTGAGCTAATTTGCCAAAATTGTGCATCTGGACCCAAACATGTTCTTCATAAGGTGATCACAATCTACAAGCATAGTTACAAAGCTGTTGTTCGCATTGATGCTATGAGAGAGCATATTGACTGCTCACAAATTCAGCCTTACAAATCCAATAAGCTTTCCGTTATTGCTCTGGAGCCTCTTCCGCACCATGGTTCTGTAAAATGGAGAAGGGCATCATCATGCAAGACCTGTAGGAGAAAGTTGGCCAACCCCAATTTATATCGTTACTGCTCCATATCTTGCAAGGTCCAAGCTGTTTTAACCTTCATTTTGCTTAAGGAGGATCAAAAGGAGGAAGCTGGAACCAGCAAGCGGGTAAATAAGAGAAAGGGAACCCCTGCCAGAGCTCCCTTCTTCTAA 564 0.4291 MSSSSSNQVAKAKKVKKALQPEWLKSLLKRTFFESSCATHPVLKNELNQYCVTCTELICQNCASGPKHVLHKVITIYKHSYKAVVRIDAMREHIDCSQIQPYKSNKLSVIALEPLPHHGSVKWRRASSCKTCRRKLANPNLYRYCSISCKVQAVLTFILLKEDQKEEAGTSKRVNKRKGTPARAPFF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03612 187 SUPERFAMILY B-box zinc-binding domain 36 84 - -
Adu03g03612 187 Pfam B-box zinc finger 35 76 IPR000315 GO:0008270
Adu03g03612 187 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 8 187 - -
Adu03g03612 187 CDD Bbox2 37 76 - -
Adu03g03612 187 Gene3D Classic Zinc Finger 10 96 - -
Adu03g03612 187 Pfam PLATZ transcription factor 78 151 IPR006734 -
Adu03g03612 187 MobiDBLite consensus disorder prediction 168 187 - -
Adu03g03612 187 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 187 - -
Adu03g03612 187 ProSiteProfiles Zinc finger B-box type profile. 37 76 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03612 Adu-Chr3 124256362 124258909 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Adu03g03612 PLATZ 4.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03612 - - ahf:112791659 356.295