Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03587 ATGGTGATTATTAGCAAGGACAGAAGTGGAAACTTCACCATCAACGCAGCCATAGCTGCGACGCCAAATAACACGGCTTCCAATTATGGCTACTTCCTTGTTTTCATCAAGAAAGGTGTGTATGAAGAGTATGTGTGCATTGCGAAGAACAAGAAACACTTGATGTTAGTTGGAGATGGAATCAACCAGACAATTATCACCGGCGATCGCAATGTTGTCGATGGCTCTACAATTATCCTCTTTCTATTCTCTCTTTCTTTGTTTTCTCTGCGAAGAGAGGAAGATGAAAAATACTGA 297 0.4108 MVIISKDRSGNFTINAAIAATPNNTASNYGYFLVFIKKGVYEEYVCIAKNKKHLMLVGDGINQTIITGDRNVVDGSTIILFLFSLSLFSLRREEDEKY 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03587 98 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 1 78 - -
Adu03g03587 98 Pfam Pectinesterase 2 77 IPR000070 GO:0030599|GO:0042545
Adu03g03587 98 SUPERFAMILY Pectin lyase-like 2 77 IPR011050 -
Adu03g03587 98 Gene3D - 1 90 IPR012334 -
Adu03g03587 98 PANTHER PECTINESTERASE 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03587 Adu-Chr3 123783596 123783892 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03587 1 77 Carbohydrate Esterase AT1G02810 57.692 2.14e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03587 K01051 - gmx:100792847 114.775