Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03576 ATGGAGCACATGATGGGTCTGCTGAGAATTCATGTCCAAAAAGGGGTTAACCTTGCTGTAAGGGATGTACTAAGCAGTGACCCTTATATCATCATCAGAATGGGCAAGCAGAAGGTGAAGACTAAGGTGGTGAAGAAGAGTATAAACCCTGAATGGAATGATGATTTGACTTTGTCTATTTCAGATCCTAGTCTCCCAGTACAGCTATTTGTGCATGACAAGGACACATTCAGCCTTGATGACAAAATGGGGGATGCTGAGTTTGATATCAGTCCGTTTGTGGAAGCGGTGAAGATGCGGCCGCAAGGCGTCCTGAACGACACCATAGTCAAAAGGGTGCAGCCTAGCAGACAGAACTGTTTGGCAGAGGAGAGCCACATTGTGTGGAGAGATGGCAAAGTGGTTCAGAACATGGTTCTTAGGCTAAGAAATGTGGAGTCTGGTGAAGTGGAGCTACAACTCCATTGGATTGACATTCCTGTCTATTCTAAACCCAGAAATAGAAATCACTACGCAAAACTTGTGCAGTTCGGGCCACACTCTCTTGGGGAAGTAAAAAGTAAAAACCTCTTGATGGAAATGAATATTGCAAGGTGTAGTCCCAAAACAGAGGGATTATTCTTTTCCAATACTTCAAGAACAGTAGGATGGGAGAACATGCAGAAACTTCCGTATAATAATGTGGCTGTCCAGAATCCAAGATGGACCTTGCGCAAATTCACATCGCCCTATCGAGCTTTTACTGCAGTGTGTCCAAGAAGGTCTTTTTTCTGTCGAACGCGTTCCATGGCAACTAGTTTGGAGGAATCTTCATCTTTACAACCTGGAGAAAATTCCACTGAGGATGAGGATCCTTATGCTGAAGAAGAATCGGAAAATTTGGCACAACCACTTACCAAAGAACAGATAATGGCTCTGCTTGTTGATACTGAAAGAGAAAAACTTACGAAGAAGCTTAGTGAAGCCAACCAGCATAATCGGTTCCTCAAAAGGCAGTTGCATATAAAGGAAGATGCATTGGTAAATTTTAAAAGTGAGCTTGCTGTCATGGAACTTGAAGTTCAGGCTTTGGTCAAACTAGCAGAAGAAATAGCAAAATCTGGTATTCCAGAAGGTTCAAGGAAGATCAACGGAAAGTACATTCATTCTCACCTGGTTACTCGATTAGAAGCTGTACATGAACAATTGATGGAACAAATAAAGGACGTTGGTGCGGCACAGTCCAAGAAGGTTTCTATTTTTTGGGTTGGAATGGCTGAGAGCGTGCAAGTTATGGGGACCTTTGATGGTTGGAGCCAAGGAGAGCACCTTTCACCTGAGTATACTGGTTCTTACACTAGGTTCTCAACAACGTTGATGCTGAGACCCGGGAGGTATGAAATCAAATTCTTAGTAGACGGTGAATGGAAGCTATCACCTGAGTTCCCCATTATTGGTGAAGGATTAACCAAAAACAATTTGTTAGTTGTCGAGTGA 1476 0.4302 MEHMMGLLRIHVQKGVNLAVRDVLSSDPYIIIRMGKQKVKTKVVKKSINPEWNDDLTLSISDPSLPVQLFVHDKDTFSLDDKMGDAEFDISPFVEAVKMRPQGVLNDTIVKRVQPSRQNCLAEESHIVWRDGKVVQNMVLRLRNVESGEVELQLHWIDIPVYSKPRNRNHYAKLVQFGPHSLGEVKSKNLLMEMNIARCSPKTEGLFFSNTSRTVGWENMQKLPYNNVAVQNPRWTLRKFTSPYRAFTAVCPRRSFFCRTRSMATSLEESSSLQPGENSTEDEDPYAEEESENLAQPLTKEQIMALLVDTEREKLTKKLSEANQHNRFLKRQLHIKEDALVNFKSELAVMELEVQALVKLAEEIAKSGIPEGSRKINGKYIHSHLVTRLEAVHEQLMEQIKDVGAAQSKKVSIFWVGMAESVQVMGTFDGWSQGEHLSPEYTGSYTRFSTTLMLRPGRYEIKFLVDGEWKLSPEFPIIGEGLTKNNLLVVE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03576 491 Gene3D C2 domain 2 173 IPR035892 -
Adu03g03576 491 Pfam C2 domain 6 92 IPR000008 -
Adu03g03576 491 Gene3D Immunoglobulins 402 490 IPR013783 -
Adu03g03576 491 PANTHER PROTEIN PTST, CHLOROPLASTIC 194 491 - -
Adu03g03576 491 MobiDBLite consensus disorder prediction 267 294 - -
Adu03g03576 491 SUPERFAMILY E set domains 410 490 IPR014756 -
Adu03g03576 491 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Adu03g03576 491 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Adu03g03576 491 Pfam Glycogen recognition site of AMP-activated protein kinase 411 487 IPR032640 -
Adu03g03576 491 CDD E_set_AMPKbeta_like_N 410 490 - -
Adu03g03576 491 SMART C2_3c 7 102 IPR000008 -
Adu03g03576 491 Coils Coil 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03576 Adu-Chr3 123662494 123668223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03576 38 160 C2H2 Transcription Factor Family AT1G70790 56.000 5.41e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03576 - - gmx:100795997 443.736