Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03557 ATGAGAAGGGAGATTGAATCTAACGGTGTGGAATGGGTTGCAGCCATGCACGAATGTGAGAGTGAAGGGGACAGTGAGAAAGATGAGAGAAAGAAGGGGATGAAAGGAAACCAAATCCAAGCTAACAAAACTGGCGGCCACCAGCTTTTCTTCTCTTTCAAATTAAACCTCTCCTTCTCTGCTGCTTGTGTATGTGTTTCTATTATGGGGAACTGTTTTAGTGCCAGGATCAAAGCTGAGAGCCCTCCACGCAATGAAGAGAAGGATTTGAGTGGTATAAGCAGCAAGGTATCTTCTCGTTCCATGCTTATGTCTCCTCTGACAGAGGGCGAGATTCTGCTATCCACCAATTTAAAGAACTTCAGCTTCATTCAACTAAGAACCGCCACAAGGAACTTTCGTCCGGATAGTGTGGTTGGTGAAGGTGGCTTTGGCTCTGTATTTAAGGGCTGGATCGACGAGCACACTCTTGAACCCACAAAACCCGGCACCGGACTCGTCATTGCCGTGAAGAGGCTAAATCAAGAGAGCACACAGGGACATACTGAATGGCTGACAGAAATCAACTACTTGGGTCAGCTGGATCATCCTAATCTTGTGAAACTCATAGGTTACAGCTTAGAAGATGATCACCGGATTTTGGTGTATGAGTTTTTGACTAAAGGCAGTTTAGATAACCATTTGTTTAGGAGAGCTTCTTATGTTCGGCCGCTTTCTTGGAACATACGCATGAATATAGCTCTTGATGCAGCTAAGGGCCTTGCATTTCTTCACAGCGACCAAGTAGATGTAATATACCGAGACTTGAAGACTTCTAACATCTTGCTTGATTCGAGCTATCATGCAAAACTGTCTGATTTTGGATTGGCAAAGGATGGACCAGTAGGTGACAAGAGCCATGTCTCTACCAGGATAATGGGAACATTTGGCTATGCTGCTCCTGAATACATAGCCACAGGTCATTTAACGAAGAAGAGTGATGTATACAGTTTTGGCGTTGTACTGCTGGAAATCATAGCAGGGAAACGCGCATTAGATAAGAACAGACCAACAGGGGAGCATAATTTGGTTGATTGGGCTAAGCCATTACTCGTCAGCAAAAGAAAAATCTCACAAGTCATGGATTCCCGTTTAGACAGTCAATATCCATTGCGCGAAGCCATGAAAGTAGCAGTTCTTGCAATCAAATATTCTGAAGACACAACAACAAGTGGAGTGGAAAAATCTCCAGATCAAACAGTTAAAACGAATGGTAATAGTGCAAGATCTAGCAGAATCAGTTCAAAACAACATAGAAGAAGTAACAATGAATCTTTAAATGGAGAAGGTAGTTCTAATAATCAGACACCATCAGCTTCTCCTCTTCACACTTAG 1374 0.4309 MRREIESNGVEWVAAMHECESEGDSEKDERKKGMKGNQIQANKTGGHQLFFSFKLNLSFSAACVCVSIMGNCFSARIKAESPPRNEEKDLSGISSKVSSRSMLMSPLTEGEILLSTNLKNFSFIQLRTATRNFRPDSVVGEGGFGSVFKGWIDEHTLEPTKPGTGLVIAVKRLNQESTQGHTEWLTEINYLGQLDHPNLVKLIGYSLEDDHRILVYEFLTKGSLDNHLFRRASYVRPLSWNIRMNIALDAAKGLAFLHSDQVDVIYRDLKTSNILLDSSYHAKLSDFGLAKDGPVGDKSHVSTRIMGTFGYAAPEYIATGHLTKKSDVYSFGVVLLEIIAGKRALDKNRPTGEHNLVDWAKPLLVSKRKISQVMDSRLDSQYPLREAMKVAVLAIKYSEDTTTSGVEKSPDQTVKTNGNSARSSRISSKQHRRSNNESLNGEGSSNNQTPSASPLHT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03557 457 ProSitePatterns Protein kinases ATP-binding region signature. 139 171 IPR017441 GO:0005524
Adu03g03557 457 PANTHER KINASE 1B 83 397 - -
Adu03g03557 457 PANTHER OS01G0588500 PROTEIN-RELATED 83 397 - -
Adu03g03557 457 Gene3D Phosphorylase Kinase; domain 1 109 218 - -
Adu03g03557 457 MobiDBLite consensus disorder prediction 401 457 - -
Adu03g03557 457 MobiDBLite consensus disorder prediction 17 36 - -
Adu03g03557 457 Pfam Protein tyrosine and serine/threonine kinase 137 347 IPR001245 GO:0004672|GO:0006468
Adu03g03557 457 MobiDBLite consensus disorder prediction 401 425 - -
Adu03g03557 457 ProSiteProfiles Protein kinase domain profile. 133 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03557 457 MobiDBLite consensus disorder prediction 17 39 - -
Adu03g03557 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Adu03g03557 457 Gene3D Transferase(Phosphotransferase) domain 1 219 430 - -
Adu03g03557 457 MobiDBLite consensus disorder prediction 437 457 - -
Adu03g03557 457 SMART serkin_6 133 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03557 457 SUPERFAMILY Protein kinase-like (PK-like) 106 357 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03557 Adu-Chr3 123415276 123417329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03557 119 396 Glycoside Hydrolase AT3G07070 49.823 3.85e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu03g03557 PK_Tyr_Ser-Thr 7.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03557 - - gmx:106795104 533.872