Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03497 ATGGTTTACTCCTTTTATAACTCCAATGATTTTTCTTCCCCCGGCTACGATGTTTCGAGGTTGATTAGTCCTTCTTTGCATGACTATGGAGCTTCCTATGGTGTTTTGGAACCATCACATGCATTGATTTTGGAGAGTGAAAAGATAGAGCAAGTGAATAATGGATCAGAAGATGCAAGGGTAGGAAAGAATTATGAGAACTCTGATGCAAAAGCCTTGGCTGCTTTGAAGAATCACAGTGAAGCTGAGAGGAGGAGGAGGGAGAGAATCAATGGTCATCTTGCAACTCTACGAGGTCTTGTTTCCTCCACTGACAAGATGGACAAAGCAACAATATTAGCAAAAGTCGTTAGCCAAGTGAAGGAATTGCAGAGGAATGCAATGGAAGCAAGTAAAGGTCTTCTAATCCCAACAGATTTTGATGAAGTTGAAGTTGAACCATATGAAGATCATAGATCCATGTCATACAAGGCATCCATCTGCTGCGATTACCGGCCGGAGATTCTCTTCGACCTGCGACACACACTTGATGCCCTTGAACTGCAACTGGTGAGGGCAGAGACATCAACCTTAGAAGGAAGAATGAAAAATGTGTTTGTGTATAGATGTTGCAAAGGGAAAGGTGACAATAATAACACCGAGGCATGTCAAGCTCTTGCGAGAAATGTTCAAAAGGCACTGAGTCGTGTAATAGATAAGGCTTCTAATGCACTTGAGTACTCACTCAGAGCTTCACTTCCATGTAAGAGGAGAAGAATCTGCTTGCTCGAGAATTGA 777 0.4247 MVYSFYNSNDFSSPGYDVSRLISPSLHDYGASYGVLEPSHALILESEKIEQVNNGSEDARVGKNYENSDAKALAALKNHSEAERRRRERINGHLATLRGLVSSTDKMDKATILAKVVSQVKELQRNAMEASKGLLIPTDFDEVEVEPYEDHRSMSYKASICCDYRPEILFDLRHTLDALELQLVRAETSTLEGRMKNVFVYRCCKGKGDNNNTEACQALARNVQKALSRVIDKASNALEYSLRASLPCKRRRICLLEN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03497 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 126 IPR036638 GO:0046983
Adu03g03497 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 123 IPR011598 GO:0046983
Adu03g03497 258 PANTHER TRANSCRIPTION FACTOR BHLH30 36 257 IPR045847 GO:0003700|GO:0006355
Adu03g03497 258 Gene3D - 71 132 IPR036638 GO:0046983
Adu03g03497 258 SMART finulus 80 129 IPR011598 GO:0046983
Adu03g03497 258 CDD ACT_UUR-ACR-like 159 231 - -
Adu03g03497 258 Pfam Helix-loop-helix DNA-binding domain 78 124 IPR011598 GO:0046983
Adu03g03497 258 PANTHER DNA BINDING PROTEIN-LIKE 36 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03497 Adu-Chr3 122432737 122436486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03497 15 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 33.040 4.16e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g03497 HLH 2.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03497 - - gmx:100818879 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03497 03 122432737 122436486 Adu03g03497 03 122432737 122436486 ECH