Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03485 ATGAGTCACGAAATAATCGGGTTAACTTCATCACTGACCCGACACTCTTCTCTTTTTGGCGGTGTTTACTATTCTATCCAAAATGAGTCAAAGAGCCTAAAGAAGTCTCTTAAGGACATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTAGCTGATGTTATTCCACCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAGTTAGTGATGCTTCCTTTACAAAGGCCTGAGCTCTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAGGGCATCTTATTATTTGGGCCCCCTGGAACAGGTAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATATGTAAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCACCTAGTGTTATATTTGTTGATGAGGTTGATAGCATGTTGGGCCGAAGGGAAAATCCTGGGGAGCACGAGGCCATGCGAAAAATGAAAAATGAATTTATGGTGAACTGGGATGGCTTACGTACAAAGGATACCGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATAAGGAGGCTGCCACGAAGATTAATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAGATATTGAAAGTTATTTTGGCAAAAGAGGACTTGTCTTCCGATATTGATTTTGATGCAATCGCAAATATGACCGAGGGGTATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCGCACCGTCCGATTAAAGAGATATTAGAAAAGGAGAAAAAGGAGCATGCTGCTGCTCTGGCAGAGGGTAGACCTGCTCCAGCATTAAGTGGAAGTTCCGATATCAGGTCACTAAACATGGAAGACTTTAAACATGCTCATCAACAGGTATGTGCAAGTGTGTCCTCTGAATCCATAAATATGACCGAGCTTTCGCAATGGAATGATCTATACGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTTAGTTACTTCATGTGA 1104 0.4212 MSHEIIGLTSSLTRHSSLFGGVYYSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDIDFDAIANMTEGYSGSDLKNLCVTAAHRPIKEILEKEKKEHAAALAEGRPAPALSGSSDIRSLNMEDFKHAHQQVCASVSSESINMTELSQWNDLYGEGGSRVKKALSYFM 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03485 367 Pfam ATPase family associated with various cellular activities (AAA) 103 232 IPR003959 GO:0005524|GO:0016887
Adu03g03485 367 ProSitePatterns AAA-protein family signature. 206 225 IPR003960 GO:0005524|GO:0016887
Adu03g03485 367 CDD AAA 101 234 - -
Adu03g03485 367 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 22 367 - -
Adu03g03485 367 Pfam AAA+ lid domain 256 294 IPR041569 -
Adu03g03485 367 Gene3D - 235 329 - -
Adu03g03485 367 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 22 367 - -
Adu03g03485 367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 343 IPR027417 -
Adu03g03485 367 Gene3D - 61 342 IPR027417 -
Adu03g03485 367 SMART AAA_5 99 236 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03485 Adu-Chr3 122269436 122272277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03485 62 311 Calmodulin-binding Proteins AT3G56690 40.467 1.59e-45 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03485 - - gmx:100780098 636.336