Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03475 ATGGAAGGGGCTATAGGGATCAAGAACTACTACTCTGAAAATAGCACAGAGTATAAAGATTTTGAAGCTCAGTTCCGGAGAACATTTCACTCCAAGTATACCGAGGAAGATAACCGCAACCCAGGATTCTACGGTCTGCAAGCATATGACAGCATTAAAATTGTTGCAAAAGCAGTCGACAGAATAGCCAGTCACAATAGTAGTAGCAGCAGTAGTGGGAAGACTTTACTAAGAGGAATATTGTCTAGCAAATTCCTTGGTTTAAGTGGAGAAATTCAATTTCAAGAATTGCAGCTCATGCAGAACCCTACCTTAAGGATTGTTAATATTGGTGGGAGGAGTTATAGGGAACTAGATTTTTGGAGTCTAGAACATGGATTTACCAGTAGATTAGGAGAAGGTGGAAATGATACTTCTAGGAACACAGAGGGTTTAAGTGGAGTGGTAATTTGGCCAGGGAAATTGTCGAGAGTTCCAAAAGGGTGGAATCTGCCTACTAAGGAAAATCCAATGAAAATTGCAGTGCCAGGAAGAACTTCATTTTCCAAGTTTGTCAAGGTCGATTATGGTGAGAATGGAAAGCCAAATATATATAGTGGATTCTGCATTGAAATTTTTGATAAGGTGTTAGAACTATTGGGTTATGATTTGCCATATGAGTACTATCCCATCAATGGAACCTATCCTGACCTGGTCCAACTTGTCTATAACAAGACTTATGAGGCTGTTGTTGGGGACATAACCTTACTAGCAGACAGAATGCCATATGTAGATTTCACTGTGCCATATGCGGAATCAGGATTGTCAATGGTAGTTCCATCAAAGTCAGATGAATCAGCATGGATGTTCATGAAGCCTTTCACCTGGCAAATGTGGGTGGTAACTGCTGCTATCTTGTTCTACACAATGTTGGTAGTGTGGTACCTGGAGCGAGAATCGAATCCCGAGTTTCATGGCAACTGGAAGAGCCAACTTAGCACTGCACTTTGGTTTACCTTCTCCTCCCTATTCTTTGCTCATAAGGAGAACTTGTCTAGCAACTTAAGCCGTGTTGTGATGGTATCTTGGCTGTTTCTAGTTCTGATCCTTAACTCGAGCTACACTGCAAGTCTTTCATCGATGCTCACAGTTCAACAACTGCAACCGAATGTCACAGACATCGAGTGGCTGAAGAAGAACAACATGAAGATTGGTTGTGATGGAGATTCTTTTGTTAGGACATACCTTGAGAGAGTAGAGAGGTTCAAGGTAGAAAACATCATAAATGTTAGCAGTGAATACAGCTATGTTGATGTATTCAAAAACGGCACCATAGCAGCTGCTTTTCTTGAACTCCCTTACGAAAAAGTATACATGAGTAAATACTGCAAGGGCTTCTCTGGCTCCACCCCTGCCATCAGATTTGGAGGACTTGGATTTATGTTCCAGAAAGGCTCCCCGGTGACCAGAGATGTTTCTAAAGCGATATTGCAGCTCTTAGAACAGGGAGAAATAAAGAGCTTAGAAGAGAAATGGCTGAGCCCCATGGGAGAGTGCGCTAGCAATGTCACCACAAACAACACAGAAAGTTTGAAGCTTGGGAGTTTCTGGATTCTATTTGTAAAAGCAAGAAACAAAGCGAAGAAAATGAGGCACGTGAGGATGTAA 1647 0.4177 MEGAIGIKNYYSENSTEYKDFEAQFRRTFHSKYTEEDNRNPGFYGLQAYDSIKIVAKAVDRIASHNSSSSSSGKTLLRGILSSKFLGLSGEIQFQELQLMQNPTLRIVNIGGRSYRELDFWSLEHGFTSRLGEGGNDTSRNTEGLSGVVIWPGKLSRVPKGWNLPTKENPMKIAVPGRTSFSKFVKVDYGENGKPNIYSGFCIEIFDKVLELLGYDLPYEYYPINGTYPDLVQLVYNKTYEAVVGDITLLADRMPYVDFTVPYAESGLSMVVPSKSDESAWMFMKPFTWQMWVVTAAILFYTMLVVWYLERESNPEFHGNWKSQLSTALWFTFSSLFFAHKENLSSNLSRVVMVSWLFLVLILNSSYTASLSSMLTVQQLQPNVTDIEWLKKNNMKIGCDGDSFVRTYLERVERFKVENIINVSSEYSYVDVFKNGTIAAAFLELPYEKVYMSKYCKGFSGSTPAIRFGGLGFMFQKGSPVTRDVSKAILQLLEQGEIKSLEEKWLSPMGECASNVTTNNTESLKLGSFWILFVKARNKAKKMRHVRM 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03475 548 Gene3D - 11 102 - -
Adu03g03475 548 Pfam Bacterial extracellular solute-binding proteins, family 3 195 507 IPR001638 -
Adu03g03475 548 SUPERFAMILY Periplasmic binding protein-like I 1 162 IPR028082 -
Adu03g03475 548 Pfam Ligand-gated ion channel 508 534 IPR001320 GO:0015276|GO:0016020
Adu03g03475 548 Gene3D - 31 126 - -
Adu03g03475 548 SUPERFAMILY Periplasmic binding protein-like II 147 506 - -
Adu03g03475 548 Gene3D - 431 513 - -
Adu03g03475 548 CDD GluR_Plant 169 506 - -
Adu03g03475 548 PANTHER GLUTAMATE RECEPTOR 3.4 1 534 - -
Adu03g03475 548 Gene3D - 180 279 - -
Adu03g03475 548 SMART GluR_14 172 508 IPR001320 GO:0015276|GO:0016020
Adu03g03475 548 Gene3D - 280 419 - -
Adu03g03475 548 Pfam Receptor family ligand binding region 3 110 IPR001828 -
Adu03g03475 548 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03475 Adu-Chr3 122164444 122166664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03475 1 536 Ion Channels AT2G29120 35.907 1.81e-105 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03475 - - aprc:113859865 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03475 03 122164444 122166664 Adu03g03475 03 122164444 122166664 ECH