Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03467 ATGGCTTCTTCGAACAGACATTGGCCAAGCATGTTCAAATCGAAGCCTTGCAACCAGTTTCAGCATGACATGGTCTCAACTACTACTGCATCTTGCCACAGATCAGCTCCTTATAATCCTATTTCAGGATGTGATGAGAAGAGTCCAGAACCGAAGCCAAGATGGAACCCAAAACCAGAACAAATCCGGATTCTGGAGGCGATATTCAATTCTGGAATGGTGAACCCTCCAAGGGATGAGATAAGGAAGATAAGGATGCAGTTACAGGAGTACGGTCAAGTGGGTGACGCCAACGTCTTCTACTGGTTCCAGAACCGCAAATCAAGGAGCAAGCACAAGCTTCGCCACCTCACTAATAATAATAGTAGGAATAACAACACTCCATCACCGTCACCACCGCCGCCGCTGCCGCCGCAGCAACAATTCATCTCAGCCACTACCAACTCATCCTCCTCCTCTTCCTCTGACAAATCATCTCCAAAGTTCGTTCCCGCTTTCACCGATGTGGTGATGCTGCTGCCTAATTCTCCAACAGCCTCTGTAAACCAGAACTACTTTCATCACAACGACACCAATAATAACAACACTATCAATCATCTCTTGGTTCCTCCACCACTACCGATCGAACCATTCTTCCCTGTGTTCCATAATAGTAGTGGCGTGGTTGCAACTACTGAGATCTCTAATAGTGTGGGTAATCATCATCAACCTCCTCATCTTGTTTATCAAGAAAACGTTGATCCTTGCACTGATCTGCTCCTTAGCGAAATCATGAGCCATGGAGGAGTAGAACCGTCCTCTAAGAGATACCATGAACAAGACAAGGCAGCGGCCACCGTCAAGATTAGGCAGCCACAACAATACATCAGCTTCTGTCCGGTTTCAACTCCTCCTCCTTCCTTCACTAACACAACCGCTACACCTATTACTGTTCCATCCCCATTTCAAGGTGCAGGTGGTGGTTGTGGTAGTGGTGATGCGTCAGCCGCGAAATGTACGGTGTACATAAATGACATGGCATGCGAAGTCGATGTGGGTCCCTTTAACGTGCGTCACGCTTTTGGTGATGAGGCGGTGCTTATCGATTCCTCCGGCCACACCGTTCTCACCGATGACTGGGGCGTCACCCTCCACCCTCTCCAGCATGGCTTCTCTTACTATCTCATCTGGTTTCTTTCCTTCTTTCTCTCGCCACCATAA 1200 0.4817 MASSNRHWPSMFKSKPCNQFQHDMVSTTTASCHRSAPYNPISGCDEKSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRMQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLTNNNSRNNNTPSPSPPPPLPPQQQFISATTNSSSSSSSDKSSPKFVPAFTDVVMLLPNSPTASVNQNYFHHNDTNNNNTINHLLVPPPLPIEPFFPVFHNSSGVVATTEISNSVGNHHQPPHLVYQENVDPCTDLLLSEIMSHGGVEPSSKRYHEQDKAAATVKIRQPQQYISFCPVSTPPPSFTNTTATPITVPSPFQGAGGGCGSGDASAAKCTVYINDMACEVDVGPFNVRHAFGDEAVLIDSSGHTVLTDDWGVTLHPLQHGFSYYLIWFLSFFLSPP 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03467 399 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 392 IPR044557 GO:0003700|GO:0050793
Adu03g03467 399 MobiDBLite consensus disorder prediction 141 160 - -
Adu03g03467 399 CDD homeodomain 51 113 IPR001356 GO:0003677
Adu03g03467 399 ProSiteProfiles 'Homeobox' domain profile. 48 113 IPR001356 GO:0003677
Adu03g03467 399 SUPERFAMILY Homeodomain-like 46 115 IPR009057 -
Adu03g03467 399 Pfam Homeodomain 52 112 IPR001356 GO:0003677
Adu03g03467 399 Gene3D - 52 117 - -
Adu03g03467 399 MobiDBLite consensus disorder prediction 111 160 - -
Adu03g03467 399 SMART HOX_1 50 117 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03467 Adu-Chr3 122060645 122062044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03467 1 121 Wox Gene Family AT2G33880 78.226 3.55e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Adu03g03467 Homeodomain 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03467 - - aip:107633725 714.916