Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03457 ATGGCGGGTTTGATTGATCTCAACACCACGGAGGACGATGAAACGCCGTCGTATGGTTCCTACGCTGCTTCTCCATCTTCTTCCTCCTCGCACTCGGGAACAAGCACTGCTTCTGTTTCAGCTTCAGCTCCGGTTGTTCCTGGTTCTTCTTCTAACTCCGTGTGTTTGGAGCTGTGGCACGCGTGTGCAGGTTCAATGATCTCGTTGCCGAAGAAGGGAACTCTTGTTGTGTACTTCCCACAGGGACACTCTGAGCAGCAACTTCACGATTTTCCTCTCTCTAACAACAATAACAGCATCCCACCCCATGTGTTCTGTCGCGTTCTCGATGTTAAGCTCCATGCAGAGGAAGGGAGTGATGAAGTGTATTGCCAGGTTTTGCTTGTTCCTGAAAATGAGCAAAAATTTCAGGAAGGGGATATTGAGGCTGATGGTGAAGAGGAGGACACGGATGCTGTGATGAAGGCAACAACACCCCACATGTTTTGCAAGACTCTGACAGCTTCCGATACCAGCACTCATGGTGGATTCTCGGTTCCCCGTCGTGCAGCTGAAGATTGCTTTCCTCCACTGGATTATAGTCAACAGAGGCCATCACAAGAGCTTGTAGCAAAGGATCTGCATGGCCGGGAATGGAAGTTTCGACATATTTACAGGGGGCAGCCACGAAGGCATTTGCTTACCACCGGATGGAGTGCATTTGTGAACAAGAAGCAGCTGGTGTCTGGAGATGCTGTCCTGTTTCTTAGGGGGGCAGATGGTGAACTGAGATTGGGAATTCGTAGGGCAGGTCAATTGAAAAGTGATGGTAAATTTTCAGCTCTCCCTCACCAGCAGTTGAATCATAGCACTCCTGTGGAAGTGATTAATGCTCTGTCTTCAAGATGTGCCTTCAGTGTTCACTATAACCCAAGGGTTAGTTCATCAGACTTCATCATACCTGTCCACAAATTCTTGAAGAGCCTTGATTATTCATATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACCGAAGATGCTGCAGATCGAAGAATCACAGGATTAATTATTGGGATTAATGATGTTGATCCTGTCAGATGGCCCGGATCAAAATGGAGATGCCTGCTGGTAAGGTGGGATGACTTAGAAACCACACGGCATAACAGGGTTTCTCCATGGGAGATTGAGCCATCAGGTTCTGCTTCCACTGCCAGTAGCCTGATGACAGCTGGTTTGAAGAGGAGCAAGATTGGATTGCCTTCAGTACAGCTAGAATTTCCAGTTCCCAATGGCATCAGTACATCAGACTTTGGGGAATCACTAAGGTTCCAGAAGGTCTTGCAAGGACATGGTACAATCCCACAAGTGAGTTCCGATGCTTCCTGCAATGGCATAGGCTTTGGTGAATCTTTCCGATTCCAAAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAATGGTCGCCTCGGAGCTTTTGATGGTTACCAGATGCTAAGGTCCAGAAATGGATGGTCTGCGCATATGAATAGCAATTCTTCTCATTTGCATGCACCCTTTTCATCTGGTCAACTCTCATCTCCATCATCCGTGTTGATGTTCCAGCAAGCATTTAATCCAGTTTCAAACTCTGATTATAGCAACAAAGCTAATCAGGTGAAGGGTGGTAAAGCACTTCAACGAGGTTCATATGCTTCTGAAGTTGATGGTGGAACGAATGCTTCCTTCCCATCTTATGAGACAACTTTCCATGGGAAAGCTCAGGAAGGAAAAAATTCTTTCACTTTTTTAAATCTGCATGATCAGTTGGGTGGTAGTCCACGTTCACCTGATTCAAGATCAGAGCCGAGAGGAAGTCAAGAGCTGGTTTCTTCATACATTGCCAATGAAGGGCATTCACGGTCAACTGCAGCATTGGTTTCAAAGTTAGAAGAAAGCACAATGCATGTTAGCGATGATCACTGGGATAAATGTAGCAAAAGTGCAATGTCTGGCATAATAATTTAG 1998 0.4605 MAGLIDLNTTEDDETPSYGSYAASPSSSSSHSGTSTASVSASAPVVPGSSSNSVCLELWHACAGSMISLPKKGTLVVYFPQGHSEQQLHDFPLSNNNNSIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPENEQKFQEGDIEADGEEEDTDAVMKATTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGQPRRHLLTTGWSAFVNKKQLVSGDAVLFLRGADGELRLGIRRAGQLKSDGKFSALPHQQLNHSTPVEVINALSSRCAFSVHYNPRVSSSDFIIPVHKFLKSLDYSYSVGMRFRMRFETEDAADRRITGLIIGINDVDPVRWPGSKWRCLLVRWDDLETTRHNRVSPWEIEPSGSASTASSLMTAGLKRSKIGLPSVQLEFPVPNGISTSDFGESLRFQKVLQGHGTIPQVSSDASCNGIGFGESFRFQKVLQGQEILPSQPYGNGRLGAFDGYQMLRSRNGWSAHMNSNSSHLHAPFSSGQLSSPSSVLMFQQAFNPVSNSDYSNKANQVKGGKALQRGSYASEVDGGTNASFPSYETTFHGKAQEGKNSFTFLNLHDQLGGSPRSPDSRSEPRGSQELVSSYIANEGHSRSTAALVSKLEESTMHVSDDHWDKCSKSAMSGIII 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03457 665 ProSiteProfiles B3 DNA-binding domain profile. 162 264 IPR003340 GO:0003677
Adu03g03457 665 MobiDBLite consensus disorder prediction 1 43 - -
Adu03g03457 665 PANTHER AUXIN RESPONSE FACTOR 447 623 - -
Adu03g03457 665 SMART B3_2 162 264 IPR003340 GO:0003677
Adu03g03457 665 Pfam Auxin response factor 289 369 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu03g03457 665 Gene3D - 160 263 IPR015300 -
Adu03g03457 665 PANTHER AUXIN RESPONSE FACTOR 46 444 - -
Adu03g03457 665 Gene3D - 325 399 - -
Adu03g03457 665 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 46 444 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu03g03457 665 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 447 623 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu03g03457 665 MobiDBLite consensus disorder prediction 10 43 - -
Adu03g03457 665 MobiDBLite consensus disorder prediction 595 617 - -
Adu03g03457 665 Pfam B3 DNA binding domain 162 263 IPR003340 GO:0003677
Adu03g03457 665 CDD B3_DNA 160 262 IPR003340 GO:0003677
Adu03g03457 665 SUPERFAMILY DNA-binding pseudobarrel domain 156 275 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03457 Adu-Chr3 121927844 121932910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03457 161 479 B3 DNA Binding Superfamily AT2G33860 63.636 7.07e-148 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu03g03457 B3 8e-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03457 K14486 - gmx:100808119 866.685