Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03447 ATGGAGGGGGAGGGTGGTTCAGAGGGAGAGAATAATCAGAGAAGGGGTGGCACAGATGATAATAGCAATGAAAATATCAATGGAAGCAATAGCAAAGTTGCGAATTCCAATGAGGGGCAGAGCAAGCCCAAGCGCCAGATGAAGACACCCTATCAACTCGAAACCCTCGAGAAAGCTTATGCCTTGGAGACGTACCCTTCTGAGGCTATGAGGGCCGAGCTATCGGAGAAATTGGCGTTGTCTGATCGGCAGCTGCAGATGTGGTTTTGCCACCGGAGGCTGAAAGACAAGAAAGACTTGCCCCCCAAGAAGCCGCCGAAGAAGGCCGTGGAGAAAGTGCGGGAGCCAGAGCCTGAACCAGTGCCGGATTCCCCAGTGGATGACCACAGATTGGGCCCCGAGCTAGGCAATGAGGATGGATCCGGGTCTGGTTCTGGGTCAAGCCCGTTTACCCGGTCAGAGTCCAGGAGTGTGGCGCCACGGGGTTATTATGAATCACAGCAGGCTGCGCTCGAGCTCAGAGCAATTTCTTGTGTGGAGGCACAGTTAGGGGGGCCATTGAGGGAAGATGGACCCATTCTAGGAATAGAGTTTGATGCATTGCCACCAGATGCATTTGGGGCGCCCTTAGCAACCATTGCAGAACAGCAGAAGCGACCAAGTCATGCCTATGACAGTAAAGTTTATGAAAGACATAATGCTAGACCAAATAAGGCTATGTCAAGGGCATTCCATGAATATCAATTTCTACGGAACCAGGCTGGCCCCAGGTCTGATGGTTTTGGACAATATCCCCAACATCATTTACATGATCCGATGGAAGGTCCTGCAAGAAATACCCATTTTGCACATGGAACTGAACAGTTACATAGAAGTCATGCTACCCAAGGTCATTCTTCTCGAGTCCGTATTTTACCTCAACAAGATAAGCAAGGGATTCCTCATCCATCTCCTCCTCAAGATGATGATGTTGCTTCCCAAAAGCAATTGCACACAAATGTAGTGAACACTGGAGTGAACTCTCATTCTACTGATTACCAAATTGTTGGGCCCGAAAATCCCTATAACCCACCAGGTGGACAAGTTTCCCATATCACTACAATGCAGATTGAGAAAAAACGAAAGAGTGATGATGCTAGAAGTGCAAGGGAAGTTGAAGCCCATGAGATGAGGATCAAGAAAGAGCTTGAGAAACAAGATAACCTTAGACGAAAGAATGAAGAGCGAATGAGGAAAGAAATGGAGAGACAAGATCGTGAAAGAAGGAAGGAAGAAGAAAGGTTGATGCGTGAGAGACAGCGAGAAGAGGAAAGATTAAGGCGTGAGCAAAAACGTGAGCTCGAACGAAGGGAAAAGTTTTTGCTGAAAGAAAATTTGAAAGCTGAGAAAATGAGGCAAAAGGAAGAGCTTCGCAAAGAGAAAGAAGCAGAGAGACGCAAAGCTGCCTTGGAGAAGGCAACTGCTCGTAGAATAGCCAAGGAATCCATGGAACTAATTGAAGACGAACAACTGGAATTGATGGAGCTTGCTGCTTCAAGCAAGGGATTGTCCTCTATAATTCATCTTGATTTTGATACTCTGCAAAACCTTGAATCATTTAGGGATTCATTGTGTGTTTTCCCACCTAAGAGTGTAAAGCTAAGAAAACCATTTGCGATCCAACCCTGGATTAACTCAGAAGAGAATGTTGGCAACCTTCTCATGGTTTGGAAATTTTTGATTACTTTTGCTGATATTCTTGAGTTGTGGCCTTTTACTCTCGATGAGTTTGTGCAAGCTTTTCATGATTATGATTCAAGACTGTTGGGTGAAATACATGTTGCTCTCCTTAAGGTGATAATAAAAGACATTGCAGATGTTGCAAGGACACCTTCCACTGGATTAGGAATGAGCCAAAATGGTGCAGCTAATTCAGGAGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGCTTTGACATACGTAATTGGCATAAGCACTTAAATCAGTTGACATGGCCAGAAATTTTTCGACAGCTAGCATTAGCAGCAGGTTATGGACCACAGTTGAAGAAAAGAAATATTACATGGTCATATGCAAATGATAAAGATGAGGGCAGGAGTTGTGAAGATATCATTTCTACACGTGGTGAAGGATTGACAGTACTAGAACTTGCAGAAAAAATTCAGAAATCCGGCCTTCGGGACCTGACAACTAGCAAGACACCGGAGGCCTCGATTTCTGTCGCTTTGACAAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCATCGACATATCGCGTACGTACTGCATTTAGAAAGGATCCAGCGGATGCCGAGTCTATTCTTTTAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCTGATGAGGTTGAACGAGAAGACGATATTGAAAGAGATGATGTTGAAAGATATGATGATGTAGAAAGAGAAGAAGAGTCAGAAAGTGAAGAAGTTGATGATGATCCTGAAGTTGACGATTTGCTAGGTCCTTCAAGTGCTAACAAAACATCTGTTCTGTGTGATGATTTCTCATCTATTGGAAAAGAAAGTTTGGGTCATAAGGTAGAACTTATTCAAGATCAGTTTGAGAAGGATCTTCCGGAGAATGGTACTAAGGATGTGGATGGTTCTAAAGATGCTCATCTTCCAGATGCTATCACTGGACAACCCGTTATTACAAACTTTGAGGAAGATAATATGGAAATTGATGAAAGCAAGACTGGAGAGTCATGGGTTGAAGGGCTTGCAGAAGGAGAATATTCTGATCTCAGTGTAGAGGAACGTTTAAATGCTCTTGTTGTATTGGTTGGTGTAGCAAATGAAGGAAATTCAATCCGCGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCTCAGATAGATAAAATTCGACTGAGAGATGATAATGTAAATAAATCAGATTTTCCATCTATCAATGGGAATAAAGTTGAACCACAATACACAAGTCCTGCTGTGGGGGGGAACCAAAGCCCATTGCTTGACATAAACATTGACAATAATAATAATAATGAGGCATCGCCTAGCACTGCAGAAAATAAAAAGGCTGCAGTTGTACAGAACCTTGCCATGGAAAAGCCCTCAATAGGTCAAGATTACTGCATTGGTCCAGATAACCCTCAAACTCAACTATCTGCTCCCTATTCGAAAAGGTCTCGTTCTCAGTTGAAATCATATATTTCTCACATGGCAGAAGAGATGTCCGTATACAGGTCTTTACCCCTTGGTCAAGATCGCAGACATAATCGCTATTGGCAATTCGTTGCATCTGCTTCTTGCAATGATCCTGGCTCTGGCAGGATCTTTGTTGAATATCTTGATGGCAATTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGCTCTTTTTAATTCACTGGATTTGCGTGGGATCAGGGAATCTCATTTGCGCATAATGTTGCAAAAGATTGGAAGTTCCTTCAAAGAAAATGTTAGGAAGAATGCACAATCTGCCAATATTGGAAGCAGAGATGAAACTAATATTAAAAATGAAGCTGATGAAGCAGAGTCCAGTCCTGATTGCCATGCATTGTCTGACAGTCCCAGCAGTACACTCTGTGGCTTGAACTCTGATACATCTGAAACTTCTTCATCATTCAAAATTGAGCTTGGGAAAAGTGAGAGTGAGAAGAAAGGTGCCTTTAGAAGGTATCAAGATTTCCAGAAATGGATGTGGAAAGAATGCTATAACTCATCCATATTATCTGCAATGAAATATGGGAAAATGAGATGCAAACCTCAGGTGGACATCTGTGATATCTGCCTCAACCCTTATTTCTTTGAAGACTCCCATTGCAATTGTTGCCATCGTACTTTTCCCTCAAATAACGGATTTAATTTTTCAAAACATATATTTCAATGTGGGGGCAAGTTGTCCAAAGATATTTGTATTCTGGATTGTTCTCTTCCCTTGCGGACAAGATTGCTTAAGGCCCTGCTGGCTTTTATTGAGGCATCTGTTCCCTCCGAAGCATTTCAATCAACTTGGACAGAAGATACTAGAAGGCATTGGGGTTTGAAGTTAAGCAAATCATCTTCTGTCGAGGAACTTCTTCAGTTATTGACTGTGTTTGAGAGAGCAATAAAGCGAGATTTTTTATCGTCATCCTTCTCAACAACACAAGAATTGTTGGGATCAAGCAGCATGTCAGAGAGTGCTTTTACCGATCCTGAATCTGTTGCTGTACTTCCATGGGTTCCACAGACCACCTCAGCTGTGTCTCTCAGACTCTCTGAGTTTGATGCGTCCATTAGCTATGTTCAGCTTGAAAAATCTGAGCATCGCAGGGAGAAAGAAACTATAGAATACATGAAGCTTCCTTCAAGATCTAATCCTTTCAAATCTAGTAGAGTAGTGGAACCAGCAGACTTGGACCATGATGAATTCATGAAAGTTAGGTCTGCTCCCATGAAAATTGTACAAAGTGGCAATAAACGTGGACGGGGGAATAGTGATAAAGGACGGGGTAAAAAGATAGCTAAAAGAATGCATGATTCCAAACAAGATACTGGCCGCCGCAGTGTTAAGGTCACAGAGAATCTTAGTCAAAGACTAAAACAGCAGGGGCGAGGAGCACAAGGACAAAGTGGTGGACGTGGTCGCCGAACTGTCAGGAAAAGACGAGTGGAAAAGAGGGCTGTTGAAGATTTGCTGCTGGGCCACAAGGCTGGCACACACAGTTCCAATATTGTTAGAGAACCATTGAGAAACCTGGATGAGGAATGGGACGATGATGAAAAGGCAAGTCCCATGACTTCCATCCACATGGGGGCTGTCGACAATAGTAACAGTGCCGAAGAGGCAGATTCTGATGACAATGCTCAAGTAGCAGAGTCCAACGACAATGCTCAAGCAGCAGATTCGGATGAAAATGCTCAAGAAGTGGATTCCGATGACAATCCTCTAGAAGTGGACTCAGATGACAATGCTCAAGCAGTGGACTCGGATGACAATGGCCAAGCAGTGGAATATGATCAAGGAAACTGGGGAATAGGTTTCAATAACACCCCCAACAGGTGGAGTAGGGATGTGGTTGGAATGATGGATGAAGATGTAGAAGCTTCAGACGAGGACAATGACAACAATGTTGGGCTTGAAGAGAACGAAGAGGAAGAATCAGAGGGTGATGATGTTTTGAGTGAGGAGGGTTCAGATGGAATTGCAGATAGAGTTTTGAATGATGACTCGGACTCTGATGATTCTGAAGATTCATCTGATTAG 5319 0.4328 MEGEGGSEGENNQRRGGTDDNSNENINGSNSKVANSNEGQSKPKRQMKTPYQLETLEKAYALETYPSEAMRAELSEKLALSDRQLQMWFCHRRLKDKKDLPPKKPPKKAVEKVREPEPEPVPDSPVDDHRLGPELGNEDGSGSGSGSSPFTRSESRSVAPRGYYESQQAALELRAISCVEAQLGGPLREDGPILGIEFDALPPDAFGAPLATIAEQQKRPSHAYDSKVYERHNARPNKAMSRAFHEYQFLRNQAGPRSDGFGQYPQHHLHDPMEGPARNTHFAHGTEQLHRSHATQGHSSRVRILPQQDKQGIPHPSPPQDDDVASQKQLHTNVVNTGVNSHSTDYQIVGPENPYNPPGGQVSHITTMQIEKKRKSDDARSAREVEAHEMRIKKELEKQDNLRRKNEERMRKEMERQDRERRKEEERLMRERQREEERLRREQKRELERREKFLLKENLKAEKMRQKEELRKEKEAERRKAALEKATARRIAKESMELIEDEQLELMELAASSKGLSSIIHLDFDTLQNLESFRDSLCVFPPKSVKLRKPFAIQPWINSEENVGNLLMVWKFLITFADILELWPFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIADVARTPSTGLGMSQNGAANSGGGHPEIVEGAYAWGFDIRNWHKHLNQLTWPEIFRQLALAAGYGPQLKKRNITWSYANDKDEGRSCEDIISTRGEGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRTAFRKDPADAESILLEARKKIQIFENGFLAGEDADEVEREDDIERDDVERYDDVEREEESESEEVDDDPEVDDLLGPSSANKTSVLCDDFSSIGKESLGHKVELIQDQFEKDLPENGTKDVDGSKDAHLPDAITGQPVITNFEEDNMEIDESKTGESWVEGLAEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKIRLRDDNVNKSDFPSINGNKVEPQYTSPAVGGNQSPLLDINIDNNNNNEASPSTAENKKAAVVQNLAMEKPSIGQDYCIGPDNPQTQLSAPYSKRSRSQLKSYISHMAEEMSVYRSLPLGQDRRHNRYWQFVASASCNDPGSGRIFVEYLDGNWRLIDSEEAFDALFNSLDLRGIRESHLRIMLQKIGSSFKENVRKNAQSANIGSRDETNIKNEADEAESSPDCHALSDSPSSTLCGLNSDTSETSSSFKIELGKSESEKKGAFRRYQDFQKWMWKECYNSSILSAMKYGKMRCKPQVDICDICLNPYFFEDSHCNCCHRTFPSNNGFNFSKHIFQCGGKLSKDICILDCSLPLRTRLLKALLAFIEASVPSEAFQSTWTEDTRRHWGLKLSKSSSVEELLQLLTVFERAIKRDFLSSSFSTTQELLGSSSMSESAFTDPESVAVLPWVPQTTSAVSLRLSEFDASISYVQLEKSEHRREKETIEYMKLPSRSNPFKSSRVVEPADLDHDEFMKVRSAPMKIVQSGNKRGRGNSDKGRGKKIAKRMHDSKQDTGRRSVKVTENLSQRLKQQGRGAQGQSGGRGRRTVRKRRVEKRAVEDLLLGHKAGTHSSNIVREPLRNLDEEWDDDEKASPMTSIHMGAVDNSNSAEEADSDDNAQVAESNDNAQAADSDENAQEVDSDDNPLEVDSDDNAQAVDSDDNGQAVEYDQGNWGIGFNNTPNRWSRDVVGMMDEDVEASDEDNDNNVGLEENEEEESEGDDVLSEEGSDGIADRVLNDDSDSDDSEDSSD 1772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03447 1772 MobiDBLite consensus disorder prediction 796 844 - -
Adu03g03447 1772 PANTHER HOMEOBOX DOMAIN PROTEIN 713 813 - -
Adu03g03447 1772 PANTHER HOMEOBOX DOMAIN PROTEIN 1651 1772 - -
Adu03g03447 1772 PANTHER HOMEOBOX DOMAIN PROTEIN 12 712 - -
Adu03g03447 1772 PANTHER HOMEOBOX DOMAIN PROTEIN 815 1643 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1657 1678 - -
Adu03g03447 1772 CDD homeodomain 44 93 IPR001356 GO:0003677
Adu03g03447 1772 MobiDBLite consensus disorder prediction 93 161 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1 52 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1628 1772 - -
Adu03g03447 1772 ProSiteProfiles DDT domain profile. 560 619 IPR018501 -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1541 1560 - -
Adu03g03447 1772 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1097 1169 IPR028941 -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1594 1614 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 254 280 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1208 1228 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 18 48 - -
Adu03g03447 1772 ProSiteProfiles HARE-type HTH domain profile. 698 766 IPR007759 GO:0006355
Adu03g03447 1772 Gene3D - 26 100 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 140 155 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1198 1228 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 798 837 - -
Adu03g03447 1772 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 12 712 IPR044977 GO:0006357
Adu03g03447 1772 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1651 1772 IPR044977 GO:0006357
Adu03g03447 1772 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 713 813 IPR044977 GO:0006357
Adu03g03447 1772 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 815 1643 IPR044977 GO:0006357
Adu03g03447 1772 Pfam DDT domain 561 616 IPR018501 -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1599 1614 - -
Adu03g03447 1772 SMART HOX_1 41 103 IPR001356 GO:0003677
Adu03g03447 1772 SMART testlast3 560 619 IPR018501 -
Adu03g03447 1772 ProSiteProfiles 'Homeobox' domain profile. 39 99 IPR001356 GO:0003677
Adu03g03447 1772 MobiDBLite consensus disorder prediction 397 442 - -
Adu03g03447 1772 Pfam HB1, ASXL, restriction endonuclease HTH domain 705 765 IPR007759 GO:0006355
Adu03g03447 1772 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 918 961 IPR028942 -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1716 1748 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 93 135 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1641 1656 - -
Adu03g03447 1772 SUPERFAMILY Homeodomain-like 29 98 IPR009057 -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1514 1540 - -
Adu03g03447 1772 MobiDBLite consensus disorder prediction 1507 1575 - -
Adu03g03447 1772 Pfam Homeodomain 42 98 IPR001356 GO:0003677
Adu03g03447 1772 Coils Coil 385 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03447 Adu-Chr3 121762664 121771851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03447 4 1704 Homeobox Transcription Factor Family AT1G28420 45.681 0.0 1248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Adu03g03447 WSD 2.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03447 - - ahf:112733536 3024.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03447 03 121762664 121771851 Adu03g03447 03 121762664 121771851 ECH
Adu03g03447 03 121762664 121771851 Adu10g00236 10 2922220 2930479 PCT