Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03442 ATGGATTCTGAGTTCTGGACCTCACGCCTTGCCGCTGCAAAAAGACAGTACGCTCTTCAGCATCATCACCCACACCTAGATCGGTTGGGAATGGATGATTTTGATTTGGAGGAAGAGGTGCGACCAGATTTTCCGTGCCCCTATTGTTACGAGGACTTCGACATCGCCTCCTTGTGTTCGCATCTTGAAGATGAACATTCATGTGAATCCAGGGTCACGATTTGTCCCATATGCTCAGTTAAAGTTGCAAGGGACATGTTGAGTCACATAACACTGCAACATGGGCACTTGTTTAAGTTACAGAGAAGGCGCAGGTTAAGAAGAGTTGCCATCCCAAACAGTCAAACATTGTCACTCTTGGGTCGTGATCTTCGTGAGGCTCATTTACAGGTGCTTCTTGGTGGCAGTGGCGGATATCGGTCATCAAACAGTTCCACAGTATCTAATGCAGCCACTGATCCGTTCTTGTCCTCTCTTATTTTAAATTTCCCTGCTTGTGAAGCTGAAGAAATTTCTAAATCTGTGGTAACCAGTGCTGAAGAGTCTTCTGCAAAGAATACAGCACCTTCACATATATGGAAATCAAGCTTTGATCCGTCGTTGAGCGCTGAAGAGCGGGAGAAAAGGATGAGACAAGCAGCTGGGAGATCTGGTTTTGTGCAGGATTTGTTTCTTTCAACCTTGTTAGGCGACTAA 696 0.4569 MDSEFWTSRLAAAKRQYALQHHHPHLDRLGMDDFDLEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGSGGYRSSNSSTVSNAATDPFLSSLILNFPACEAEEISKSVVTSAEESSAKNTAPSHIWKSSFDPSLSAEEREKRMRQAAGRSGFVQDLFLSTLLGD 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03442 231 Pfam Drought induced 19 protein (Di19), zinc-binding 43 95 IPR008598 -
Adu03g03442 231 Pfam Stress-induced protein Di19, C-terminal 117 228 IPR027935 -
Adu03g03442 231 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 230 - -
Adu03g03442 231 SUPERFAMILY TRAF domain-like 44 142 - -
Adu03g03442 231 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 230 IPR033347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03442 Adu-Chr3 121677962 121680751 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu03g03442 Di19_C 4.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03442 - - gmx:100792230 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03442 03 121677962 121680751 Adu03g03442 03 121677962 121680751 ECH