Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03391 ATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCAGCATGGACGATGAATCAGGACGTTGGCACGTTGCGTTCTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCGGGCCATCGGAAGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGTAAAGGGGGCATTGGCGTCTCCCGAATCCACAATTTTATGGCGAGCCTGGCCAGCGGGTATCATAATGCCCCGTACACAACAAGGAACATGCACAATGTAAATGCGAAGCAACGAATGGAGGGTGGCCTAGATGCGGAATCGTGCCTAAGGTATCTCCAAGAGTGCAAGGCAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCATGTTGCAACacttgttttgGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATTCACACCGTCTCTCGATACGGCACTCCGGGGAAGGAGTGGCGTGTTGTTGCAACGTCTGATACAAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTATGAACATATAATTGCGGTGCTTATTCTTAACAATGTTCATGAGATCCCAAGGTCTCTGATATTACCGAGATGGACTAAGGATGCAAAACTTGTGGTGATGCAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGAAAAGTGTGCAAGATTACATGTCACAGCATCGAAAAGTTCCAGTTTGCAAGAGACATTGCCGTGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGAACACCAGTTTTCCACACGAGGGGCCACCTACTGAGGGTGGCAGACCCCCGGCACGGAATCCACCCAAGCGCAATACAAAGGGTAACGGTGCTCATGGTGGAAAGAAGACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACAACGTGTCCGGAGCGTCGTACAATGGAACCATCCAGCGCAGTTGCAGAAGACATGGATTCGATGGACAATGACATGGTCTATGATAACCTATCCGGCGATCTGTATGCGACCGCGGAGATTCCTTCGTTCCAATGCTCCGATAGTGACACGCAGGCTGGGTTTGCTAACAGCAACTTTGCTGGGACCAACACGTCCGGGCCAGTCATGTCTCTCGCCGATTGA 1257 0.5171 MPNRQKRPRAETRCGCPARMLLSMDDESGRWHVAFFSDAHNHHVLELRFSSMLPGHRKMSEADIEQMNDMRKGGIGVSRIHNFMASLASGYHNAPYTTRNMHNVNAKQRMEGGLDAESCLRYLQECKANDPALYYKEVVDGEGMLQHLFWACAMRVVDSEDNGSYFIHTVSRYGTPGKEWRVVATSDTREVRCTCMRMECFGVPYEHIIAVLILNNVHEIPRSLILPRWTKDAKLVVMQSMGVIWDSVQLTQHWCLMDWYRKVCKITCHSIEKFQFARDIAVLMLKHFENEDAGNTSFPHEGPPTEGGRPPARNPPKRNTKGNGAHGGKKTQRCRLCREVGHNRTTCPERRTMEPSSAVAEDMDSMDNDMVYDNLSGDLYATAEIPSFQCSDSDTQAGFANSNFAGTNTSGPVMSLAD 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03391 418 PANTHER OS03G0181600 PROTEIN 178 285 - -
Adu03g03391 418 PANTHER OS03G0181600 PROTEIN 4 160 - -
Adu03g03391 418 ProSiteProfiles Zinc finger SWIM-type profile. 180 216 IPR007527 GO:0008270
Adu03g03391 418 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 178 285 IPR031052 GO:0006355
Adu03g03391 418 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 160 IPR031052 GO:0006355
Adu03g03391 418 SUPERFAMILY Retrovirus zinc finger-like domains 320 355 IPR036875 GO:0003676|GO:0008270
Adu03g03391 418 Pfam FAR1 DNA-binding domain 4 45 IPR004330 -
Adu03g03391 418 MobiDBLite consensus disorder prediction 293 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03391 Adu-Chr3 120989422 120991549 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g03391 FAR1 1.8e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03391 - - adu:107480712 568.926