Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03390 ATGAAATTGACGTTTATATACTTGTGCTGTTACTCAGGCTATCCACTTGATAATGTTAGACATTTCTCTGACAAAGAACTGAGATTGGCTACTGATAATTATCATCCAAGATATAAGATAGGACGAGGAGGTTTTGGAATTGTTTACAAGGGAATCTTAAAAGATGGGAGACAAGTAGCAGTGAAGACCCTTTCAGCTGGGTCAAGGCAAGGAGTTCGTGAATTTTTAACTGAGATTAAAACTATATCAAATGTTAAGCATCCAAACCTTGTTGAGTTGGTCGGTTGCTGTGTTCAAGGGCCTAATCGTATACTAGTCTATGAGTATGTGGAAAATAACAGCCTTGATCGTGCATTACTTGGCACAAGGAGTATAAACATCAGACTAGACTGGAGAAAAAGATCTATTATTTGCATGGGCACTGCGAGGGGTCTTGCATTTCTTCATGAAGAACTTGTGCCACACATCGTGCACAGAGACATCAAAGCGAGCAACATACTACTTGACACAGACTTTAATCCAAAAATAGGAGATTTTGGGTTGGCTAAATTATTTCCTGATGACATCACTCATATTAGCACAAGAATTGCTGGAACAACTGGTTACTTGGCGCCTGAATATGCAATTGGTGGCCAGTTAACCCTGAAGGCTGATGTGTATAGTTTTGGGGTTCTTATACTTGAAATAGTTAGCGGCAGAAGCAGTTCAAGGACAAACTGGGGAGACTCATACAAACTCCTCTTGGAATGGGCATGGCAACTCCATGAAGAGGGGAAGTTGGTGGAGCTTGTGGATCCAGAAATGGGAGAGTTTCCTGAGGAAGAGGTGATTAGGTACATGAAGGTAGCATTCTTCTGCACACAAGCAGCTGCAAGCAGAAGGCCAATGATGTCACAGGTTGTTGATATGTTGTCCAAGAAAACAAAGCTCAATGAGAAGCAACTCACAGCACCAGGTTTCTTCCAAGACTCAGGAGAGTCTTCTCTAAAGAAGTCTTCTGGTGAGTCCACAAGCTATCAGTTTAGCTCTACCCCTGCCAGTATTACACAGGTCAACCCCCGGTAA 1065 0.4225 MKLTFIYLCCYSGYPLDNVRHFSDKELRLATDNYHPRYKIGRGGFGIVYKGILKDGRQVAVKTLSAGSRQGVREFLTEIKTISNVKHPNLVELVGCCVQGPNRILVYEYVENNSLDRALLGTRSINIRLDWRKRSIICMGTARGLAFLHEELVPHIVHRDIKASNILLDTDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAIGGQLTLKADVYSFGVLILEIVSGRSSSRTNWGDSYKLLLEWAWQLHEEGKLVELVDPEMGEFPEEEVIRYMKVAFFCTQAAASRRPMMSQVVDMLSKKTKLNEKQLTAPGFFQDSGESSLKKSSGESTSYQFSSTPASITQVNPR 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03390 354 Pfam Protein kinase domain 35 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03390 354 Gene3D Transferase(Phosphotransferase) domain 1 110 322 - -
Adu03g03390 354 SUPERFAMILY Protein kinase-like (PK-like) 17 334 IPR011009 -
Adu03g03390 354 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Adu03g03390 354 PANTHER - 25 347 - -
Adu03g03390 354 PIRSF ILK 11 317 - -
Adu03g03390 354 MobiDBLite consensus disorder prediction 316 354 - -
Adu03g03390 354 SMART serkin_6 34 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03390 354 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 347 - -
Adu03g03390 354 CDD STKc_IRAK 40 306 - -
Adu03g03390 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Adu03g03390 354 ProSitePatterns Protein kinases ATP-binding region signature. 40 62 IPR017441 GO:0005524
Adu03g03390 354 ProSiteProfiles Protein kinase domain profile. 34 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03390 Adu-Chr3 120983058 120987642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03390 22 342 Receptor kinase-like Gene Family AT1G56120 53.374 1.37e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu03g03390 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03390 - - gmx:100775344 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03390 03 120983058 120987642 Adu10g00294 10 3491916 3493826 PCT