Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03338 ATGGCTTCTGCTGCTGCTTCCGTGTCTTCTTCCTCCTTGCCGTCGTCCGGGTTCTGCTACAACCCTGAATGTAAAGAATTGAAGTCTCAAATACCTAAGAAAGGTTGGAGACTCCGTTCCGGAGACCGAGCTGAACTTTGTGATCGATGCGGCTCTGCTTTTGAAGAAGGAAGATTTTGCGAGACTTTTCATTTGAACACTTCTGGTTGGAGGAACTGTGAGACTTGTAGGAAGCGGATTCATTGTGGATGTATTGTCTCAGATAACTCGTTTATGTTGTTGGATCCTGGTGGAGTTGAATGTAATGGATGTGCAAAGGAACATCATATGTCATCAACCCGGCCATGGTCTCAGTCTTTTTCCGCTACTTTATCTGAAAGACTTAGAGACATCTCCACAAATAATTGGAATCAGTTAGCTGGATCAGGTCCTGTACCATGGAAGCAAGCACCCAGCCTATATAATTCTGTTTCTTCATCCAACCTGCAGCCAGGTGTGGCCTCTCTAGTTGAATTGACACATAAACTTGGCAAAATTTATGGAAATGAAAGATTGCCTGCTTTTTCTCTGGGAAAGAAAAATGAAAATTTTCCTGGAATATCCAACTGGAACACTAAGCTTGCATCACAGGAGATAATGCTTGTGAATGGAGCAATGAATGAGGACCAACCTAGTTCATGTTTAAATATTTGCCAGCAGTCTTCTTCTGTAAAGGAGGATTCATCTCCGCAACCTTTTGCATTGCCTGTACCTTATGCATCTCCAAATGAAAGAAATGGTCAAACTGGGGGGAATCAACTACAACAAACCCCTCCAGCTCCTCTAGGAAAGCAATATAGTGGCACTGTTCATTTATCACTTGACACATCAGGTGAAACACAAGTTCGTAATGGACGGCCTCGAGTAGATGCACGAGGAAGAAGCCAGTTACTCCCACGGTACTGGCCCAGATGTACCGATCAGGAGCTACAGCAAATATCTATCGATTCTAATTCTGTCATTACCCCGTTGTTTCAAAAAACCTTGAGCGCTAGTGATGCTGGGCGAATTGGGCGTCTAGTGCTTCCAAAGAAATGTGCTGAGGCTTATTTCCCTCCAATTTCACAGCCTGAAGGGTTGCCACTCAAAATCCTTGATGCAAAAGGCAAAGAGTGGATATTTCAGTTTCGTTTCTGGCCCAACAATAACAGTAGAATGTATGTTTTGGAAGGTGTCACTCCCTGCATACAGTCCATGCAGTTGCAAGCAGGTGACACAGTAACATTTAGCCGGCTGGAGCCAGAAGGGAAGTTGGTTATGGGATTTCGAAAGGCTTCAACTGCTACCCAATCTGATCAGGACAATGAAGCAAATAAGACCGGAAATGTACACTCCACAATTGGTGAAGTTGAAATGGCTGATCCTAGTTCATGGTCTAAAGTTGATAAATCAGGATACATTGCAAAAGAAGCACTTGGGAGCAAATCTTCAATCTCTAGAAAGAGAAAGAGCAGCATCTTAGGTTCAAAGAGTAAACGTTTAAAAATTGAAAATGAGGATTTGATAGAACTCAAGATTACTTGGCAAGAGGCTCAAGGCCTGCTAAGGCCTCCTCCTGACCATGTCCCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGATGCTCCAGTGCTGGGTAAACCAACCATTTTCACCACTAGTAATGAAGGTGAAAAGATCCAGTGGGCTCAATGTGAAAATTGTCAAAAGTGGCGCAAATTGCCAGCAAGTGCAATTCTTCCCTCAAAATGGACGTGCTCTGACAATTCATGGGACCCAGAAAGATCCTCTTGCTCAGTGGCACAAGAGCTGACTGCAGAAGAGCTCGAGAATTTGCTACCTTCTTGTAATTCAGGTTTCGATGTTGACTCCTTCTTTTGA 1911 0.4359 MASAAASVSSSSLPSSGFCYNPECKELKSQIPKKGWRLRSGDRAELCDRCGSAFEEGRFCETFHLNTSGWRNCETCRKRIHCGCIVSDNSFMLLDPGGVECNGCAKEHHMSSTRPWSQSFSATLSERLRDISTNNWNQLAGSGPVPWKQAPSLYNSVSSSNLQPGVASLVELTHKLGKIYGNERLPAFSLGKKNENFPGISNWNTKLASQEIMLVNGAMNEDQPSSCLNICQQSSSVKEDSSPQPFALPVPYASPNERNGQTGGNQLQQTPPAPLGKQYSGTVHLSLDTSGETQVRNGRPRVDARGRSQLLPRYWPRCTDQELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKASTATQSDQDNEANKTGNVHSTIGEVEMADPSSWSKVDKSGYIAKEALGSKSSISRKRKSSILGSKSKRLKIENEDLIELKITWQEAQGLLRPPPDHVPSIVVIEGFEFEEYEDAPVLGKPTIFTTSNEGEKIQWAQCENCQKWRKLPASAILPSKWTCSDNSWDPERSSCSVAQELTAEELENLLPSCNSGFDVDSFF 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03338 636 Pfam CW-type Zinc Finger 571 613 IPR011124 GO:0008270
Adu03g03338 636 ProSiteProfiles Zinc finger CW-type profile. 566 616 IPR011124 GO:0008270
Adu03g03338 636 Pfam B3 DNA binding domain 338 437 IPR003340 GO:0003677
Adu03g03338 636 Gene3D - 570 624 - -
Adu03g03338 636 ProSiteProfiles B3 DNA-binding domain profile. 338 439 IPR003340 GO:0003677
Adu03g03338 636 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300-LIKE ISOFORM X1 15 626 - -
Adu03g03338 636 CDD B3_DNA 336 437 IPR003340 GO:0003677
Adu03g03338 636 SUPERFAMILY DNA-binding pseudobarrel domain 335 437 IPR015300 -
Adu03g03338 636 MobiDBLite consensus disorder prediction 233 280 - -
Adu03g03338 636 SMART B3_2 338 439 IPR003340 GO:0003677
Adu03g03338 636 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 15 626 - -
Adu03g03338 636 Gene3D - 316 443 IPR015300 -
Adu03g03338 636 MobiDBLite consensus disorder prediction 255 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03338 Adu-Chr3 120082225 120091338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03338 33 623 B3 DNA Binding Superfamily AT4G32010 44.265 2.16e-146 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu03g03338 B3 4.8e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03338 - - gmx:100807252 969.918