Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03326 ATGGGTAACGAAGAAGACTTCGCCGGAGAACCCAACTCCTTTAGGAAGGAGGCACCCGCCGGAACTTCCAACCTCCTCCGGCGAGCAGCGGAGCTCATTGCCACCGTGCTCTCCCTCTCCCTCTCGATCAGGGCCTTCGCCACCAAATGGCAACTCATCCGGACCAAGCTCGAGGAGCTCCACTCCGGCCTAATCGCCGCCGAGAACTACGACTCCGGCGAGAACCCACAGCTCACGGGCATCCTCCCATCGGTGATTTCGACCGCCGGAGAGTGCCGCGACTTGGCGCGCCGTTGCTCCGACCTCTCCTACAGCGGGAAGCTCCTTATGCAGAGCGATTTGGACGTGGCGATCGCAAAGCTGGACGGCCACGTCAGCACCCTCTCGGAGATTTACAAAAAGGGAATATTGGCGAATGGGTCTGCCCTCGTCGTTTCAAAACCGAGTCTTGGCGCTTCAAGAGAAGACATAAGGTTCTACGTGAGGGACCTATTAACGAGGATGAAGATTGGGGATTTGGGTATGAAGAAAGTGGCTCTCAGGAACCTGTACGAGGTTGTCGTCGAGGATGAGAGGTACGTTAAGGCCGTTGTGGACGTTGGTGACGTGGTTCATGTGCTGGTTGGGTTTCTTGGTTCAACTGAATCGGGACTCCAAGAGGAGAGTGCAAAGGTTGTTTCTGTGATTGCAGGATTTGGTTGCTACAAGGGCAATTTGGTAAATTCAGGAGTGGTTGCGCCGTTGGTTAGGGTGCTGGATTGTGGGAGCGAAGAAGGGAAAGTTGCTGCAGCGAGGTGTTTGGTGAAGCTCACTGAGAATTCTGATAACGCTTGGTGTGTTTCTGCACATGGTGGTGTCACTGCGTTGCTTAGAATTTGTGATGGTGATGATGGTGGTTGTGACGGAGATTTGATTGGTCATGCGTGCGGTGTGTTAAGCAATCTTGTTAGTGTTGAAGAGATTAAGAGGTTTATGATTGAGGAAGGTGCGGTTTCTACGTTTATAAGGCTTGTGAGGTCCAGGGATGAAGCCATTCAAGTGAATTCAATAGGCTTCATTCAGAACATTGCCTCTGGTGATGAATTGGTTAAGCAGATGGTGATTAGAGAAGGTGGAATCCGTGCTCTGTTGCGTGTTCTTGATCCTAAATGGCCCTGTTCTTACAAAACAAGGGAGATTTCAATAAGGGCTATTGAGAATTTGTTTTTCTCTCCGCTTAGCTCTGTGAGTGCTTTGATTAGTTACGGTTTTGTGGATAGTTTGCTGTATTATGTTCGAAATGGCGAGGTTTCCATTCAAGAATTGGCGCTGAAAGTGGCATTTCGATTGTCTGGAACGTCCGAGGAGGCCAAGAAATCAATGGGGGATGCAGGTTTCATGGCTGAGCTTGTGAAATTCCTGAATGCGAAATCGTTCGAGGTTCGCGAAATGGCAGCTGAGGCACTCTCTGGGTTGGTTATGTTGCCTAAGAACAGAAAGAGGTTTGTGCAGGATGACCATAACATTGCACTTATCCTTCAATTGCTTGATCCTGAAGAGGGGAATTCAGGTAACAAAAAGTACTTAATCTCAATCTTAATGTCATTGACAAGTTGCAATAGTGGGAGGAAAAAGATTGTTAGTTCTGGTTATGCAAAGAACATTGAGAAGCTTGCAGATGCTCAAGTTTCTTCTGATGCCAAGAAACTTGCAAAGAAGCTATCCACAAACAGGTTCCGCAGCTTGTTCAGTGGAATCTGGCATTCATGA 1749 0.4871 MGNEEDFAGEPNSFRKEAPAGTSNLLRRAAELIATVLSLSLSIRAFATKWQLIRTKLEELHSGLIAAENYDSGENPQLTGILPSVISTAGECRDLARRCSDLSYSGKLLMQSDLDVAIAKLDGHVSTLSEIYKKGILANGSALVVSKPSLGASREDIRFYVRDLLTRMKIGDLGMKKVALRNLYEVVVEDERYVKAVVDVGDVVHVLVGFLGSTESGLQEESAKVVSVIAGFGCYKGNLVNSGVVAPLVRVLDCGSEEGKVAAARCLVKLTENSDNAWCVSAHGGVTALLRICDGDDGGCDGDLIGHACGVLSNLVSVEEIKRFMIEEGAVSTFIRLVRSRDEAIQVNSIGFIQNIASGDELVKQMVIREGGIRALLRVLDPKWPCSYKTREISIRAIENLFFSPLSSVSALISYGFVDSLLYYVRNGEVSIQELALKVAFRLSGTSEEAKKSMGDAGFMAELVKFLNAKSFEVREMAAEALSGLVMLPKNRKRFVQDDHNIALILQLLDPEEGNSGNKKYLISILMSLTSCNSGRKKIVSSGYAKNIEKLADAQVSSDAKKLAKKLSTNRFRSLFSGIWHS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03326 582 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 329 372 IPR000225 GO:0005515
Adu03g03326 582 Pfam Armadillo/beta-catenin-like repeat 320 358 IPR000225 GO:0005515
Adu03g03326 582 Gene3D - 160 571 IPR011989 -
Adu03g03326 582 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 582 - -
Adu03g03326 582 SUPERFAMILY ARM repeat 162 566 IPR016024 -
Adu03g03326 582 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 284 330 IPR000225 GO:0005515
Adu03g03326 582 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 582 - -
Adu03g03326 582 SMART arm_5 273 317 IPR000225 GO:0005515
Adu03g03326 582 SMART arm_5 360 403 IPR000225 GO:0005515
Adu03g03326 582 SMART arm_5 447 487 IPR000225 GO:0005515
Adu03g03326 582 SMART arm_5 190 231 IPR000225 GO:0005515
Adu03g03326 582 SMART arm_5 318 358 IPR000225 GO:0005515
Adu03g03326 582 SMART arm_5 232 272 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03326 Adu-Chr3 119849200 119851572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03326 144 381 U-box Gene Family AT2G23140 25.794 1.38e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03326 - - adu:107480628 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03326 03 119849200 119851572 Adu10g00348 10 4061170 4064514 PCT