Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03322 ATGGGAAGAACACCTTGCTGTGAGAAGAATGGGCTGAAGAAAGGGCCATGGACGCCAGAGGAGGATCAGAAGCTCGTTGATTACATTCACAAACATGGCTACGGCAATTGGAGAACACTCCCTAAGAATGCCGGGTTGCAAAGATGCGGAAAGAGTTGCCGTCTGCGGTGGACAAACTATCTCCGGCCAGATATAAAGCGAGGTCGATTCTCCTTGGAAGAGGAGGAGACCATAATACACCTTCACAGCATTCTTGGAAACAAGTGGTCTGCAATAGCGTCGCGGCTGCCGGGGAGGACAGACAACGAAATAAAGAATTATTGGAATACACACATTAGGAAGAGGCTACTGAGGATGGGAATCGATCCTGTGACACACAGTCCACGCCTAGACCTTCTTGATCTCTCATCTCTCTTTGGTTCATCAATATCACACATCAACAATAACATGCAACACCATCTTAACCCTGAGCTTCTCAAATTGGCCACGTCACTCTTCTCTCATAATAATAATAATAATAATAATAATAATTCTCTTGACAACAGCCACAACCAAATCATCAGTAGTGATGTTTCCTTGTCTTTCCCTCAAGCAAACTTTCTAGAATCCAATAATAATGTCGACTCACCATACCCATCAAATCTACTGCACCATGACCTAATGAATACTAGTGATTATTGGCACGCCGATAATAATAATAATATTGGAATTGCTTCAACTTCTAGCCCTTGTTATGTCACTGACCAATTACCAACAAGTTATTATTATAACAATAATAGTAACAACTACTACTCTCATCATGCAAGTCTTGTGGACCCACCTATGTCTGAAACGTCAACCTTTCATTCCAATAATAGCAGCAGTAATACTTATGTCAATGGAAACAACAGTAGCACCGAGGATGAGAGAGAAAGCTATGTCAGCACCAATAACAGCGTCTTGAGATTTGAAATCCCAGATATGTTGGATGTCAATGCATTCGTGTAA 987 0.4174 MGRTPCCEKNGLKKGPWTPEEDQKLVDYIHKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSLEEEETIIHLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSLFGSSISHINNNMQHHLNPELLKLATSLFSHNNNNNNNNNSLDNSHNQIISSDVSLSFPQANFLESNNNVDSPYPSNLLHHDLMNTSDYWHADNNNNIGIASTSSPCYVTDQLPTSYYYNNNSNNYYSHHASLVDPPMSETSTFHSNNSSSNTYVNGNNSSTEDERESYVSTNNSVLRFEIPDMLDVNAFV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03322 328 CDD SANT 69 112 IPR001005 -
Adu03g03322 328 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu03g03322 328 CDD SANT 16 61 IPR001005 -
Adu03g03322 328 Gene3D - 13 66 - -
Adu03g03322 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Adu03g03322 328 PANTHER TRANSCRIPTION FACTOR MYB41 1 323 - -
Adu03g03322 328 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu03g03322 328 MobiDBLite consensus disorder prediction 275 304 - -
Adu03g03322 328 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu03g03322 328 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Adu03g03322 328 Gene3D - 69 116 - -
Adu03g03322 328 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu03g03322 328 SMART sant 66 114 IPR001005 -
Adu03g03322 328 SMART sant 13 63 IPR001005 -
Adu03g03322 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Adu03g03322 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03322 Adu-Chr3 119762410 119763745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03322 1 328 MYB Transcription Factor Family AT4G21440 53.134 9.14e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu03g03322 Myb_DNA-binding 8.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03322 K09422 - zju:107421995 338.191