Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03320 ATGGATTGCATAAAACAGCGGTATTTTGGCACTGAGAATGAAGTTAAGAAGGCATGCCCTGTTTGTAGAGGAACTTGCACTTGTAAGGACTGTTTGGCAAGTCAATATAAAGACAGTGAAAGTAAGGAACATTCGGCTGATAAAAGCAGAGTTGGTAGAATATTGCATTTACATTACCTACTCTGTATGCTCCTTCCAGTACTGAAACAAATAAGTGAATATCAGGATACTCAGCTAGAAACTGAAGCAAGAATTAAAGGGATAGAAGCTTCTGATATTCACATCAGGCAGGTTGAATTTGGCTTCAATGAGAAAATTTTCTGCAATCACTGCAAAACTCCCATTTTGGATCTCAATAGAAGCTGCCCTAGTTGCTTATATAGCCTTTGCTTAAATTGTTTTCAAGAATTAAGTCAGGGAAGCATTTCTGGAGAATCAATGTTGAAGCTACCGATTAAAACAAAAACTTGCGCTGCCCGTGAGAAAGAAAATGCGGATGAGAAGGCCATTTCTAGTTGCAATATAACTCATTGTAATGGCATTGACAATGTATCATTTCCATCTACAGAACTTGGTGGTTGTGGTCATAGCCACCGTGATTTGAGATATATTTTTCCCTCTAGTTTGATCAAAGAGATGGAACTAAAGGCAGAAGAAATCGTTTGCAGTTATGAATTGCCAGAAACACCAGACAAAAGTTCAAAATGCTCAATGTGTTCTGACACAGATCACAAAACTAAAAGACATAAGCAGTTGCAAGAAGCAGCTTTAAGAGGGGATTCAAATGATAATTGCTTGTTTAACCCCACAGTTTCGGACATCAATGGTGATAATTTTGAACACTTTCAAAAACACTGGGGAAAAGGCCATCCCGTAGTGGTGCAAGATGTTCTTCGAAAGACATCAAACCTCAGCTGGGATCCACTGATCATGTTCTGTAGTTATCTTGAGCGGAGCATTACAAGATACGAGAGTGATAAGGACTTACTTGAATCTTGTTTGGATTGGTGTGAGGTGGAAATTAACATTAGGCAGTCTTTTAGCGGGTCTCTCAAATGTCGTCCTTGCGAAAACACTTGCCATGAGATGCTGAAATTAAAGGGGTTGTTGTCTTCCCAACTTTTCAAAGAGCAATTTCCAGGTCATTTTTCTGAAGTAATTGATGCTCTACCAATTCAAGAATACATGAATCCTATGTCTGGTCTTCTGAATTTGGCAGCAAGTTTGCCACTTCAGAGTACCAAACATGACATTGGACCATACGTGCATATTTCATATGGCTGTGCCGACAAGGAAGCTGATTCTGTGACTAAACTCTGCTATGATTCATATGATGTGGTTAATATTATGGCACATACCACGGATGTTCCCCTATCTACAGAGCAGCTTTCAAAAATTCGACGACTACTGAAAAAGCATAAAGCTTTGTGTCGAAGGGATTCTTCTAAAATTACTGCTGAACAACAACAGGAAGAGAAAGTAAAAGAAACGTTACCACCACATGTTGAAGAAGTGGAACAAAAAGGTTCACAGCGAGTGGCCAAAGAAGTTGACTTTTTAAGGAGAGTCAATAGAACATCCTTTGTCTCAACTCACACTGAAAAAGCAACTACTGGAAGTATAGAGAACAGCTTTTCCCAGGATAGAGAATGTGATTTATCTGATTCCGATTCGGAACCCACAGTTCTCCATGGGTTGTCTACAGGTCGTAATCCAAGAAATCTGTTTGAAAGCTCGAAAGATAAAAATAAGTTATCTGCTGAGCATTCTGGGGCCCAATGGGATGTATTCCGCAGACAAGACGTTCCAAAGCTCATGGAATACCTTATAAGACATTGTGATGAATTTACTCATAACTATGACAATGACAAAGTGATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACAAAAATCACAAAATAAGGCTTAAAGAGGAGTTTCAGGTTGAACCATGGACATTCAAGCAACATGTTGGAGAAGCCGTTGTCATTCCCGCTGGATGTCCATACCAGATCAGAAATCCTAAGTGTTGCGTTCATGTGGTGTTGGAATTTGTGTCACCGGAAAATGTCTCCGAGTGTATCCAGCTGATTGATGAGGTCCGACTGCTGCCGGCAGACCATAAAGCCAAAGTAGAAACTTTGCAGGTAAAGAAAATGGTGCTTCATAGCATGAATACAGCAATTAAGGAAATGCATGAGCTTACAAACAAGCCAGCCAAAACATGA 2235 0.3973 MDCIKQRYFGTENEVKKACPVCRGTCTCKDCLASQYKDSESKEHSADKSRVGRILHLHYLLCMLLPVLKQISEYQDTQLETEARIKGIEASDIHIRQVEFGFNEKIFCNHCKTPILDLNRSCPSCLYSLCLNCFQELSQGSISGESMLKLPIKTKTCAAREKENADEKAISSCNITHCNGIDNVSFPSTELGGCGHSHRDLRYIFPSSLIKEMELKAEEIVCSYELPETPDKSSKCSMCSDTDHKTKRHKQLQEAALRGDSNDNCLFNPTVSDINGDNFEHFQKHWGKGHPVVVQDVLRKTSNLSWDPLIMFCSYLERSITRYESDKDLLESCLDWCEVEINIRQSFSGSLKCRPCENTCHEMLKLKGLLSSQLFKEQFPGHFSEVIDALPIQEYMNPMSGLLNLAASLPLQSTKHDIGPYVHISYGCADKEADSVTKLCYDSYDVVNIMAHTTDVPLSTEQLSKIRRLLKKHKALCRRDSSKITAEQQQEEKVKETLPPHVEEVEQKGSQRVAKEVDFLRRVNRTSFVSTHTEKATTGSIENSFSQDRECDLSDSDSEPTVLHGLSTGRNPRNLFESSKDKNKLSAEHSGAQWDVFRRQDVPKLMEYLIRHCDEFTHNYDNDKVMVHPILDQSIFLDKNHKIRLKEEFQVEPWTFKQHVGEAVVIPAGCPYQIRNPKCCVHVVLEFVSPENVSECIQLIDEVRLLPADHKAKVETLQVKKMVLHSMNTAIKEMHELTNKPAKT 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03320 744 MobiDBLite consensus disorder prediction 533 547 - -
Adu03g03320 744 MobiDBLite consensus disorder prediction 533 584 - -
Adu03g03320 744 Pfam JmjC domain, hydroxylase 590 685 IPR003347 -
Adu03g03320 744 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 739 IPR045109 GO:0032454|GO:0033169
Adu03g03320 744 SMART cupin_9 379 704 IPR003347 -
Adu03g03320 744 MobiDBLite consensus disorder prediction 560 574 - -
Adu03g03320 744 SUPERFAMILY Clavaminate synthase-like 278 726 - -
Adu03g03320 744 ProSiteProfiles JmjC domain profile. 398 704 IPR003347 -
Adu03g03320 744 PANTHER PROTEIN B160 1 739 - -
Adu03g03320 744 Gene3D Cupin 269 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03320 Adu-Chr3 119741921 119745971 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Adu03g03320 JmjC 9.3e-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03320 K15601 - gmx:100787798 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03320 03 119741921 119745971 Adu10g00355 10 4096778 4102484 PCT