Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03313 ATGTGCTTTGCAGAAAATCCTCTCTGCCTTATCATGGGTCAAAATCAAAAACCAAAGTTACATTGCCATTATTGGCTGCTAAGTTCTTTGACAGTAGTCCTTCTTAACATCTCATTTGGCTCTTGCTTTGACACCATATCCACTGACAAAGCCCTCAGAGATGGTGAGATTCTTGTTTCTAGGGACAAGACTTTTGCTATGGGATTCTTCAGCCCAGGCAGGTCCACTTCCCGTTACATCGGAATCTGGTACAACAATCTGCCACAACAAACTGTTATTTGGGTTGCAAACAGAAACACTCCCATCGATGACACATCTGGGGTTCTCTCAATCAACCAACATGGAAATCTAGCACTCCACCATAATCATAGCATTCTTCCAATTTGGTCTACCAATGTTTCAGTCACACCTTCAGACACAAACAAAGTTATAGCTCAACTCACAGACATAGCCAACCTTGTTCTGATCCTTAACGACACCAAAACTGTCATCTGGCAAAGCTTTGATCAACCAACAGATACTTTGATTCCCCACCTGAGATTAGGATTTGACAGAGGAAAAGACCAGAGCTGGGTCATCCAATCTTGGAAAACAGATGATGATCCTTCACCTGGTGACTTCACATTGAAGTTCAGCACCAATGGTATGCCACAGTTGTTTTTATACCACAAGAATCTTCCATGGTGGCGAGGAGGGCCGTGGAATGGTGAGTTTTTCATGGGTATACCCAACATGAAACGAGATAACAACATTTTCAATGTTTCTTGTGAGGAAGATGAGAACCATGCAGCACTCTCATATAACACCTATGACAAATCCGTTCCCAGTTGGGTGGTGGTTCAGCAATCTGGTTTCTTTCAAGTGTTCACTTGGGATAACCAGAAGAATCAGTGGAACCGGTACTGGTCAGAGCCTACTGGTCAATGTGATAACTATGGAACATGTGGACCTAACAGTAACTGTGACCCTTTGAACTATGAGGATTTTCAGTGCACTTGTCTGCCCGGGTTTGAACCGAAATTCCCGCGTAACTGGTATGAGAACAGAGATGGTTCAGGAGGGTGTGCGAGGAAGAAAGGTGCCTCTGTTTGTGGGAGTGGAGAAGGGTTTGTGAATATTGAAGGATTGAAGGTTCCTGATACATCTGTGGCTATAGTTAAGGAGGGTTTGAGTTTGGAGGAGTGTGAGAAGGAATGCTTGAGAAACTGTTCTTGCAGTGCTTATGCAGTTGCTAATGTGGCCAGTGGTGGAAGTGGATGCTTTGCATGGCATGGTGATTTGATGGACATAGAGAAGCTTAGTGATCAAGGCCAAGAAATATTTGTACGTGTTGATGCTGTTGAATTAGCTAATTATTACAAGAAAACAAAAGAAGCATTTGGTAAGAAAAAGATTGTAGGGGTTCTGGTAGCTTCTTTGTTTGCAGTTCTCCTTATTCTGGCCTGTGTATATCACTTGCGGTTGCAGAAGAAAAAGAAAGAAGATAAAATGTTGCGGCAATTGAATCAAGATTCTCCTAGAGAAAACAGTGATGATATTCAAAGTAAAGGAGATCCAAATCTCCCCTTCTTCAGCATTAAAATAATCATGGCAGCCACAAAAAATTTTGCTCCTCAGAATAAACTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTCAGCTATACAATGGACAAGAGATAGCAGTGAAAAGATTGTCCAGAGATTCTGGACAAGGAATAGAAGAATTTAAAAATGAAGTTACACTATTAGTTAAACTTCAACATAGAAATCTTGTGAGATTGCATGGTTGTTGCCTTGAAAAGGAAGAAAGAATGCTTGTCTATGAATACCTTCCAAACAGAAGTTTGGACTTCTTTATATTCGATAAACTCCAAAGGTCATTGTTAGACTGGGATCGGCGTTTTGAAATTATTTATGGGATTGCTCGAGGTGTGTTATATCTTCATCAAGATTCAAGATTAAAAATAATTCACAGAGATCTCAAAGCTAGCAATGTTCTCCTTGATGCCACAATGAATCCGAAAATCTCAGACTTTGGCATGGCTAGAATATTTGGCGAAGATCAAATCCAAGCCAGAACGAGAAGAGTAGTAGGAACATATGGTTATATGTCACCCGAATATGCAATGGAAGGACGATATTCAACAAAATCTGATGTCTTTAGTTTTGGAGTCTTACTTCTAGAGATTATTGCCGGCAAGAGGAACACAGATAGCAGCGACAAAGAAAGAGCCTCCCCAAATTTAATTGGATATGTATGGAAATTGTGGACAGAAGGAAAGGCTTTGGATATGGTAGACACAACACTAGACCAATCTTATCCTCCTGAGATAGCTTTGAAGTGCATTCAAATTGGACTATTGTGTGTGCAAGAAAATGTGAACAAGAGACCTTCCATGTTGGAGGTTGTTTTCATGTTAGGGAATGAAGCACCTATTTGTCCACCTCAAAAGCCAGCATTTTTATTCAATGGCAACCAAGATGACTTGCAAGAGTCATCAACATCTGGAGGAGGATCTTCAATTAATGAAGTAACAGCAACTACCATCTCTGCTAGATAA 2565 0.4078 MCFAENPLCLIMGQNQKPKLHCHYWLLSSLTVVLLNISFGSCFDTISTDKALRDGEILVSRDKTFAMGFFSPGRSTSRYIGIWYNNLPQQTVIWVANRNTPIDDTSGVLSINQHGNLALHHNHSILPIWSTNVSVTPSDTNKVIAQLTDIANLVLILNDTKTVIWQSFDQPTDTLIPHLRLGFDRGKDQSWVIQSWKTDDDPSPGDFTLKFSTNGMPQLFLYHKNLPWWRGGPWNGEFFMGIPNMKRDNNIFNVSCEEDENHAALSYNTYDKSVPSWVVVQQSGFFQVFTWDNQKNQWNRYWSEPTGQCDNYGTCGPNSNCDPLNYEDFQCTCLPGFEPKFPRNWYENRDGSGGCARKKGASVCGSGEGFVNIEGLKVPDTSVAIVKEGLSLEECEKECLRNCSCSAYAVANVASGGSGCFAWHGDLMDIEKLSDQGQEIFVRVDAVELANYYKKTKEAFGKKKIVGVLVASLFAVLLILACVYHLRLQKKKKEDKMLRQLNQDSPRENSDDIQSKGDPNLPFFSIKIIMAATKNFAPQNKLGQGGFGSVYKGQLYNGQEIAVKRLSRDSGQGIEEFKNEVTLLVKLQHRNLVRLHGCCLEKEERMLVYEYLPNRSLDFFIFDKLQRSLLDWDRRFEIIYGIARGVLYLHQDSRLKIIHRDLKASNVLLDATMNPKISDFGMARIFGEDQIQARTRRVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGKRNTDSSDKERASPNLIGYVWKLWTEGKALDMVDTTLDQSYPPEIALKCIQIGLLCVQENVNKRPSMLEVVFMLGNEAPICPPQKPAFLFNGNQDDLQESSTSGGGSSINEVTATTISAR 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03313 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Adu03g03313 854 Pfam Protein tyrosine and serine/threonine kinase 539 806 IPR001245 GO:0004672|GO:0006468
Adu03g03313 854 ProSiteProfiles EGF-like domain profile. 305 343 IPR000742 -
Adu03g03313 854 Pfam S-locus glycoprotein domain 229 341 IPR000858 GO:0048544
Adu03g03313 854 SUPERFAMILY Protein kinase-like (PK-like) 519 824 IPR011009 -
Adu03g03313 854 MobiDBLite consensus disorder prediction 825 854 - -
Adu03g03313 854 Gene3D Hepatocyte Growth Factor 362 443 - -
Adu03g03313 854 Pfam PAN-like domain 364 430 IPR003609 -
Adu03g03313 854 CDD STKc_IRAK 542 808 - -
Adu03g03313 854 PIRSF SRK 16 854 IPR024171 GO:0004674
Adu03g03313 854 Gene3D - 40 168 IPR036426 -
Adu03g03313 854 SMART serkin_6 536 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03313 854 SUPERFAMILY alpha-D-mannose-specific plant lectins 92 202 IPR036426 -
Adu03g03313 854 CDD PAN_AP_plant 364 444 - -
Adu03g03313 854 Coils Coil 854 854 - -
Adu03g03313 854 Pfam D-mannose binding lectin 91 197 IPR001480 -
Adu03g03313 854 Gene3D Transferase(Phosphotransferase) domain 1 612 813 - -
Adu03g03313 854 PANTHER - 27 851 - -
Adu03g03313 854 SMART ntp_6 365 444 IPR003609 -
Adu03g03313 854 ProSiteProfiles Bulb-type lectin domain profile. 43 168 IPR001480 -
Adu03g03313 854 ProSitePatterns Protein kinases ATP-binding region signature. 542 564 IPR017441 GO:0005524
Adu03g03313 854 Gene3D Phosphorylase Kinase; domain 1 510 611 - -
Adu03g03313 854 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 27 851 - -
Adu03g03313 854 ProSiteProfiles PAN/Apple domain profile. 364 445 IPR003609 -
Adu03g03313 854 CDD B_lectin 52 171 IPR001480 -
Adu03g03313 854 SMART blect_4 49 171 IPR001480 -
Adu03g03313 854 ProSiteProfiles Protein kinase domain profile. 536 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03313 Adu-Chr3 119659071 119662902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03313 475 854 Receptor kinase-like Gene Family AT3G45860 50.904 2.38e-124 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu03g03313 PK_Tyr_Ser-Thr 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03313 - - aprc:113859914 1243.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03313 03 119659071 119662902 Adu10g00376 10 4422079 4426063 PCT