Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03310 ATGACAATATTTTCTTCTAATAAACTCCTACTTTTCACGATGATCCTGTTCATTCCTTCTTGCCATTCACTTCATACCATAACCATAACACCAAACCAACCCCTCAAAGACGGCGACGTTCTTGTCTCCCAAGACAAAGGAACCTTCGCACTCGGTTTCTTCAGCCCCGCAAATTCCACAAGCCGCTACCTTGCTATATGGTACAACAAAATCTCACAACAAACCGTTGTTTGGATTGCCAACAGAGACACTCCCATTAACCACACTTCAGCTGTTCTCTCCATCAACAACCACGGAAACCTCGTCCTCCACCACCAAAACACAACCCCAAACCTTAACCCTCTTTGGTCCTCCAACGTCACTCTCTCGTCTACCAATACTTCAGCCAAGCTTCTCGACACTGGAAACTTGATTCTAATCCAAAGAGGAAGAAGCAGCAACAATAATAGCAATAGCGACGATTTTGTTGTGTGGCAGAGTTTTGATTATCCCGGCAACACACTCCTTCCCTTCATGAAACTCGGATTGGACCGGAAAACCGCGTTGGACCGGTTCCTCACATCATGGAAGTCCCAAACCGACCCGGGATCCGGGAATTTCACTTTCAGGATCGACCCGACCGGTTTCGCCCAACTGTTCCTGTACAAGAACAAGACAGTTGTATGGCGGGTCGGGTCATGGACGGGTGAAAGGCTGACCGGAGTGCCCGAGATGACTCCGAACTTTATCTTCAACATTAGCTTTGTTAGCGACACGAAGGAAGTTAGCATAATGTACGGAGTGAAGGACCCCAACGTGCTCTCCAGGATGGTGCTGGACGAGACGGGTCACGTGAGGAGGATGACGTGGCAGGCTCACGAGCTAAGATGGTTCGAATTCTGGTACGCGCCCAAGGAGCAGTGTGATAACTACAGGCAGTGCGGCTCAAACACCAACTGTGACCCGTATGAGGAGGACAAGTTCATGTGCAAGTGCCTGCCGGGGTTCGAGCCCAGGTTCGAGAGAGAGTGGTACCTTAGAGATGGGTCAGGTGGGTGCGTGAGGAAGGCTAACGTGTCGACGTGTCGAAGCGGGGAGGGGTTTGTTGAAGTGGCGCGTGTGAAGGTGCCGGATACTTCGAAGGCGCGTGTAGATGCGGGGATGAGCATGAAGGATTGCAGGGTGAAGTGTTTGGGAGACTGCTCGTGTGCGGCGTATACGAGTGCCAACGAGACTACTCAGACTGGCTGCGTTACGTGGCATGGTAACATGGAGGATACTAGGACCTACACACAAGTGGGCCAAAATTTGTTCGTACGTGTCGCTGCAATTGAGTTAGCTCAATATGCGAAAAATCGCCATGGTTCTCTTGGCAAGAAGGGGATGTTAGCACTTTCGGGAGTTTCAGCTTTCTTATTCTTGTTTCTGGTGGTCATGTTGGGCTATTGGTTTCTGAAAGCCAAGAAACAAGGGAGAAGAACGGATCGCAAGTATTCATTTCGTCTTAGTTTTGAGGACTCTACCAATCTACAAGATTTTGATAGTACGCAAAATTCAGATTTACCATTCTTTGATCTAAGCTCAATAGCTGCTGCAACAGATAATTTCTCCCCTGACAATAAACTTGGTCAAGGTGGATTTGGTTCTGTATATAAGGGGCTATTAAATAATGGAAAGGAAATTGCAGTGAAGAGATTGTCTAAAAATTCTGGACAGGGCATAGACGAGTTTAAAAATGAGGTCGTTTTGATTTCAAAGCTTCAACATCGAAATCTTGTGAGGATCTTAGGCTGTTGCATTCAAGGAGATGAGAAGATGCTAATATACGAATACTTGCCTAACAAAAGCTTAGATTCTTTTATTTTTGATGAATCTAAAAAGTCACAGTTAGATTGGAAAAAACGATTTCAAATTATATGTGGAATTGCCAGAGGAATGTTATATCTTCATCATGATTCACGACTAAGAATCATTCATAGAGATTTAAAGACAAGCAATGTCTTGTTAGATTCTGAATTGAATCCTAAAATTGCCGATTTTGGAATGGCAAGAATATTTGGCGGAAATCAAGTTGAAGCAAATACTAACCGTGTTGTTGGAACCTATGGATATATGTCACCGGAATATGCTATGGAAGGACAATTTTCAATTAAGTCTGATGTATATAGTTTTGGAGTTTTGCTCCTAGAAATCATTACGGGCAGAAAGAATAGTGGTCAATACGACGACATTACTACGACAAATTTAGTCGGCCATATATGGGATCTGTGGAAAGATGGGAGAGCCATGGAGATTGTTGATGAATGTTTATTGGAAGAGTCATGTTGTGAGCATGAAGTCCAAAGATGCATACAAATTGGACTTTTGTGCGTTCAAGATTACCCCACAGACAGGCCATCAATGGCAGCAGTAGTTTCCATGCTGGGAAATGACTCAGCCCTTCCTTCTCCAAAACATCCAGCATTTATTTTCAAGAGGGGCAAAAATTATGAGAGTTCAGATCCATCAACCAGTGACGGTGTTTATTCAGTCAACGACGTAAGTATGACTATAATTGAAGCTCGCTAG 2547 0.4464 MTIFSSNKLLLFTMILFIPSCHSLHTITITPNQPLKDGDVLVSQDKGTFALGFFSPANSTSRYLAIWYNKISQQTVVWIANRDTPINHTSAVLSINNHGNLVLHHQNTTPNLNPLWSSNVTLSSTNTSAKLLDTGNLILIQRGRSSNNNSNSDDFVVWQSFDYPGNTLLPFMKLGLDRKTALDRFLTSWKSQTDPGSGNFTFRIDPTGFAQLFLYKNKTVVWRVGSWTGERLTGVPEMTPNFIFNISFVSDTKEVSIMYGVKDPNVLSRMVLDETGHVRRMTWQAHELRWFEFWYAPKEQCDNYRQCGSNTNCDPYEEDKFMCKCLPGFEPRFEREWYLRDGSGGCVRKANVSTCRSGEGFVEVARVKVPDTSKARVDAGMSMKDCRVKCLGDCSCAAYTSANETTQTGCVTWHGNMEDTRTYTQVGQNLFVRVAAIELAQYAKNRHGSLGKKGMLALSGVSAFLFLFLVVMLGYWFLKAKKQGRRTDRKYSFRLSFEDSTNLQDFDSTQNSDLPFFDLSSIAAATDNFSPDNKLGQGGFGSVYKGLLNNGKEIAVKRLSKNSGQGIDEFKNEVVLISKLQHRNLVRILGCCIQGDEKMLIYEYLPNKSLDSFIFDESKKSQLDWKKRFQIICGIARGMLYLHHDSRLRIIHRDLKTSNVLLDSELNPKIADFGMARIFGGNQVEANTNRVVGTYGYMSPEYAMEGQFSIKSDVYSFGVLLLEIITGRKNSGQYDDITTTNLVGHIWDLWKDGRAMEIVDECLLEESCCEHEVQRCIQIGLLCVQDYPTDRPSMAAVVSMLGNDSALPSPKHPAFIFKRGKNYESSDPSTSDGVYSVNDVSMTIIEAR 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03310 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 195 IPR036426 -
Adu03g03310 848 SMART blect_4 32 164 IPR001480 -
Adu03g03310 848 CDD STKc_IRAK 535 801 - -
Adu03g03310 848 Pfam PAN-like domain 355 419 IPR003609 -
Adu03g03310 848 Gene3D - 23 161 IPR036426 -
Adu03g03310 848 Pfam Domain of unknown function (DUF3403) 803 848 IPR021820 GO:0004674
Adu03g03310 848 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 41 843 - -
Adu03g03310 848 SUPERFAMILY Protein kinase-like (PK-like) 511 801 IPR011009 -
Adu03g03310 848 SMART ntp_6 356 434 IPR003609 -
Adu03g03310 848 Pfam D-mannose binding lectin 75 190 IPR001480 -
Adu03g03310 848 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Adu03g03310 848 SMART serkin_6 529 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03310 848 ProSiteProfiles Protein kinase domain profile. 529 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03310 848 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 41 843 - -
Adu03g03310 848 PIRSF SRK 1 848 IPR024171 GO:0004674
Adu03g03310 848 Pfam S-locus glycoprotein domain 222 332 IPR000858 GO:0048544
Adu03g03310 848 CDD PAN_AP_plant 353 435 - -
Adu03g03310 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Adu03g03310 848 CDD B_lectin 32 164 IPR001480 -
Adu03g03310 848 ProSiteProfiles PAN/Apple domain profile. 355 435 IPR003609 -
Adu03g03310 848 Gene3D Transferase(Phosphotransferase) domain 1 605 808 - -
Adu03g03310 848 Gene3D Phosphorylase Kinase; domain 1 503 604 - -
Adu03g03310 848 ProSiteProfiles Bulb-type lectin domain profile. 26 152 IPR001480 -
Adu03g03310 848 Pfam Protein tyrosine and serine/threonine kinase 532 801 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03310 Adu-Chr3 119608617 119611990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03310 469 848 Receptor kinase-like Gene Family AT4G23150 52.455 6.94e-130 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu03g03310 PK_Tyr_Ser-Thr 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03310 - - gmx:100812814 1317.75