Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03308 ATGGCTGACGATGAGGATTTCCAAGGTGCAGCAGGGATTTGCGGTGAGAACTGGTGGAGGAGTATTGATTCAACAAGGAGTGTGTTTCCTCCTCTAACCTCATCATCACCATCTTCAACTTCACCTTGTTCCGTGGCACCACCCACCGACACTAGAACTTGGCCAAGTAGTGATGATCATCATCATTGTTTCATGGATTTGAAGGCACCGGCGTGTGATATTATTAGTAACAATAATAATAATAATTACCATATGAGTTTTCATGATGCGCAAGAGAAGCCACACAACAACAAGACTACTACTAATGAATCACAAAGTGGAAGCATGTTGATCGATTCAACCTTCCAAATGATGGGTTTTGGCTTGTCTTCACCCAATTGGGATCATCAATCTCTGTTAGAGAATAATAATTCACAAATAATCCAAAAGGATTATTGGAGCAGAAAGAACTTTGGAACCCAACAACAACAAGTTTCAAGTACCATGGATGTTTTCAAGCGCATGAACAACCAAGAATTTTCCTCATCAACTTATGGTTACCCGTCATCAACACTGATTCAAACATTATATGATCCACAGCAGCAGCCACAGCGCTCATCATCATCATCATCATCACTTTTCACCAACCGTTCCATGTCCTATTCATCATCTTCTACAGTGAATTATCATCATGCCTCCGATGAAGTGTCACTGTCACCAATCACATGGCCTAAACTCTTTTCTTCTTCTTCTTCATCATCATCTTCTTCTTTATCACTACTTCCCCCAATGGCAAAGCACCCTGACAATAACAATATTGGACTTCACTTTTCCAACAACAACACCCCTTTCTGGAACGCTTCCTCCGACGCACTTCACGACATTAGAGCAGGTGCTTTTCCTTTTGAAGAAGAAGACAACAAACCCAATTCCCCCATTATTCTACTCAACAAGCTTAAGAGCGAAGAATTGTGTGTGGACTCGGTAAAGAAAAATAATAATGTTTGCTCATCACCACCTCCATTCAAAAGGGCAAGAATTGAAACTCCACCCCCTTTACCAACTTTTAAGGTTCGGAAAGAGAAGTTAGGGGACCGAGTTACTGCTCTTCAGCAACTGGTTTCACCTTTCGGAAAGACCGACACTGCATCCGTTCTCCACGAAGCTATTGAGTACATCAAGTTTCTTCACGATCAAGTCAGCGTTTTGAGTACTCCATACATGAAGAGTGGAGCTTCCATTCAACCCAATCAGGAATGTAATGATTGGAAAGAGTCACCAGAAGTGGCAAAACGAGATTTGAGAAGCCGAGGGCTATGTTTGGTACCAATTTCAAGCACATTCCCGGTTGCTACGGAGGTGAGTGCTGATTTCTGGACGCCAACATTGTCATTCGGAGGAGCACTTCTAAGATAG 1395 0.4237 MADDEDFQGAAGICGENWWRSIDSTRSVFPPLTSSSPSSTSPCSVAPPTDTRTWPSSDDHHHCFMDLKAPACDIISNNNNNNYHMSFHDAQEKPHNNKTTTNESQSGSMLIDSTFQMMGFGLSSPNWDHQSLLENNNSQIIQKDYWSRKNFGTQQQQVSSTMDVFKRMNNQEFSSSTYGYPSSTLIQTLYDPQQQPQRSSSSSSSLFTNRSMSYSSSSTVNYHHASDEVSLSPITWPKLFSSSSSSSSSSLSLLPPMAKHPDNNNIGLHFSNNNTPFWNASSDALHDIRAGAFPFEEEDNKPNSPIILLNKLKSEELCVDSVKKNNNVCSSPPPFKRARIETPPPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKSGASIQPNQECNDWKESPEVAKRDLRSRGLCLVPISSTFPVATEVSADFWTPTLSFGGALLR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03308 464 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 51 446 - -
Adu03g03308 464 CDD bHLH_AtbHLH_like 346 397 IPR045239 -
Adu03g03308 464 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 405 IPR036638 GO:0046983
Adu03g03308 464 MobiDBLite consensus disorder prediction 30 58 - -
Adu03g03308 464 Gene3D - 350 411 IPR036638 GO:0046983
Adu03g03308 464 MobiDBLite consensus disorder prediction 30 53 - -
Adu03g03308 464 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 389 IPR011598 GO:0046983
Adu03g03308 464 PANTHER TRANSCRIPTION FACTOR BHLH103 51 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03308 Adu-Chr3 119557794 119560953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03308 5 464 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 37.605 2.21e-58 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03308 - - ahf:112791361 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03308 03 119557794 119560953 Adu10g00383 10 4543220 4545859 PCT