Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03286 ATGGAAGATCCTACCTATCTTCATCAGTGGCATTTGAGCTCTATTTATGAGCCTACTTTACTTCCGATTGCTGCTGCTTTTGGAGAGACTTTACAGCAACATTCATTCTCTCATCCCAGTTTCAACTCCAAAACTTCCATGGAAACTTCACTTTCTAACATTGACAGACCTACAAAACATCTCAAGAACAATAGCTGGTGTCCAACTAAAACTCCATCCGAGGCACAATTTGCTTCTTGCTCAACTCTTCTTTCATTTGTGGATCCCAATTATATAAACCAGTTGGAAGTGGTGAAGTCTAAGGATGAGATGGTTTGTCCTAAAATGAATGACACAACTCCTAAAGACATGAACTTTCAAGGAACATTAGGAAATCAATATGTGTTCGAAGCTAGTCAGGCGACTAAGCATGTAGGGCCACGTTCTAGACTTTCTCAACCTCAAGACCACATAATAGCCGAAAGGAAGCGTCGAGAGAAGCTCAGTCAACGGTTCATTGCTCTATCTGCCCTTGTTCCTGGACTACAGAAGACAGACAAAGCTTCTGTTCTTGGAGATGCTATCAAATACTTAAAGCAATTGCAAGAGAAGGTGAAGGCTCTTGAAGAAGAACAGAACAAGAGAAAAGCTGTGGAATCTGTAGTATTTGTGAAAAAATCTCAATTATCCAATGATGCAGAAGACGCTTCTTTAGAATATGAGGGTATCTTCCATGAGGCATTACCTGAAATTGAAGCAAGATTCTGTGATAAAAATGTTCTCGTAAGAATCCACTGCGAGAAGAACAGAGGAGTTGTAGAAAAATCAATCAATCAAATTGAGAAACTCCATCTAAAAGTTACCAATAGCAGTGCCATGACATTTGGGAGCTGGGCCTTAGATATAACTATTATTGCTCAGATGGAAAAGGGATTTTGCATGACAGTGAAGGAGCTTGTGAGAAACCTGCGCTCAGCTTTTGCATCTATCATTTGA 975 0.4 MEDPTYLHQWHLSSIYEPTLLPIAAAFGETLQQHSFSHPSFNSKTSMETSLSNIDRPTKHLKNNSWCPTKTPSEAQFASCSTLLSFVDPNYINQLEVVKSKDEMVCPKMNDTTPKDMNFQGTLGNQYVFEASQATKHVGPRSRLSQPQDHIIAERKRREKLSQRFIALSALVPGLQKTDKASVLGDAIKYLKQLQEKVKALEEEQNKRKAVESVVFVKKSQLSNDAEDASLEYEGIFHEALPEIEARFCDKNVLVRIHCEKNRGVVEKSINQIEKLHLKVTNSSAMTFGSWALDITIIAQMEKGFCMTVKELVRNLRSAFASII 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03286 324 SMART finulus 151 200 IPR011598 GO:0046983
Adu03g03286 324 CDD bHLH_AtNAI1_like 148 220 - -
Adu03g03286 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
Adu03g03286 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 208 IPR036638 GO:0046983
Adu03g03286 324 Coils Coil 184 214 - -
Adu03g03286 324 Pfam Helix-loop-helix DNA-binding domain 148 195 IPR011598 GO:0046983
Adu03g03286 324 PANTHER BHLH TRANSCRIPTION FACTOR 1 323 - -
Adu03g03286 324 Gene3D - 143 218 IPR036638 GO:0046983
Adu03g03286 324 PANTHER SYMBIOTIC AMMONIUM TRANSPORTER 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03286 Adu-Chr3 119282180 119283984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03286 1 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.943 5.17e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g03286 HLH 3.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03286 - - vun:114179595 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03286 03 119282180 119283984 Adu03g03286 03 119282180 119283984 ECH
Adu03g03286 03 119282180 119283984 Adu10g00448 10 5170448 5173252 PCT