Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03260 ATGGCGGTTTCATCCATTTTGTTCCTCTACGTAGTCATCTTCCCTTATTATGCATCATCCTTAACCTTCAACTTCACCAGTTTTGATTCCAACAACAATAACAACACCCTAAGATATGAAGCATGGGCAGAAACAGAGGAAGAAACTATCCAGCTGATAGGAAAAGCGCACTTGAATAACAGCATTGGTCGTGCAGTGTACTACAAACCCATGCACCTGTGGGACAAAGCTTCAAGGAACCTCACACACTTCACAACCCATTTCTCATTCATCATTGATTCCCAGAATAGAACTAACTATGCAGATGGACTTGCATTCTTCCTCCGCCCCAACGGTTCCACCGTCCCCAGTGCCACGGCCGGAAGAACTCTGGGCCTCACTGTTGACAACCAAGATACACTCAACATAACTGTAGACCCCTTTGTGGCCGTGGAATTCGATATCTTTAAGAATTATTTCGATCCGCCCAATGAACATGTGGGTATTGATGTTAACTCCTTGAGGTCTGTTGCTAATACCACATGGTTTTCTAAGGCTAACATTATGGGAGGGAAAGTCAATGAGGCTTGGATCAGTTACAATGCTACTTCCATGAATCTTAGTGTTGTCTTCACTGGTTTCAACTCAGCCACCAACACTACCATGCTGCAGAATCTGTTTGCTGTGGTTGACTTGAGAGAATATCTTCCTGAATATGTTGCAGTTGGATTCTCAGCTGCCACAGGAACTTCTTTTGCTTTGCACAAAATTCTCTCTTGGGATTTAAACTCAACTTTGGGAGACGACATAGCGAAAGCAGAATCCCCTGTTGCAATGAATCCATCTTCCAGTGcagctcccaatcatGAGAAAAAGGCCAGCAACACCGGACCAACAGTGGGATTGGGAATTGGTGGAGTTGTTGTGTTTGTTGGGTTGTGTTTGGTTTTGGTTGGATTGTGGAAAAAGTGGAAGAAAGGAAGTGATGAAGAGGAAGATGATGATCAAGATTTTGAGGAGTATGTGGGGGAAGATTTCGGAAGAGGAGCAGGACCCAAAAAGTATTCATTTTCTGAATTAGCGTTTGCAGCTGATAACTTCAAAGATGAGAACAAGCTTGGTCAAGGTGGATTTGGAGGTGTTTATAGAGGGTATCTCAAAGATATCAACTCCTACGTTGCCATCAAGAGGGTTTCAGAACATTCTCATCAAGGAATAAAGGAATTCGCATCGGAAGTAAAGATCATTAGCCGGCTTAGGCACCGAAATCTTGTCCAACTGATTGGTTGGTGTCCGAAAAGGAAGAAGCTCTTGCTTGTATATGAGTACATGCCTAATGGAAGTTTAGATGTTCATCTTTTCAAGAAGCAGAATCTGCTGGGATGGACAGTTAGATACAACATAGCTCGAGGCTTGGCGGCCGCACTGCTATACTTGCACGAAGAATGGGAACAATGTGTTGTGCATAGGGACATCAAATCAAGCAACATCATGCTGGATTCAGAGTTCAATGCCAAACTTGGGGATTTTGGGCTAGCAAGGCTTGTTGACCATGCAAAAGGCGCGCAAACCACGGCTCTAGCCGGTACTCCGGGCTACATGGCTCCAGAATGCAATACCACATGGAGGGCTACTAAAGAATCAGATGTGTACAGTTTTGGAGTGGTGGCATTGGAGATAGCATGTGGAAGGAAACCCATCAAATATAAGGCTCCGGAAAGTGAAATCAATATTGTAGAATGGGTGTGGGGTCTTTATGGAAGTGGAAGGGTTCTTGAAGCAGCGGATGAAAGGCTAGATGGAGATTTTGTAAAGGAACAAATGAAATGCTTGATGGTTGTTGGGCTGTGGTGCGCTCACCCATGTCACAACAATAGGCCTTCAATAAGACAAGCCATTCAAGTTCTCAACTTTGAAGCTCCCTTACCCACTCTTCCAGCAAAGTTGCCAGTACCAACCTATCTTGATGGGTGA 1953 0.4398 MAVSSILFLYVVIFPYYASSLTFNFTSFDSNNNNNTLRYEAWAETEEETIQLIGKAHLNNSIGRAVYYKPMHLWDKASRNLTHFTTHFSFIIDSQNRTNYADGLAFFLRPNGSTVPSATAGRTLGLTVDNQDTLNITVDPFVAVEFDIFKNYFDPPNEHVGIDVNSLRSVANTTWFSKANIMGGKVNEAWISYNATSMNLSVVFTGFNSATNTTMLQNLFAVVDLREYLPEYVAVGFSAATGTSFALHKILSWDLNSTLGDDIAKAESPVAMNPSSSAAPNHEKKASNTGPTVGLGIGGVVVFVGLCLVLVGLWKKWKKGSDEEEDDDQDFEEYVGEDFGRGAGPKKYSFSELAFAADNFKDENKLGQGGFGGVYRGYLKDINSYVAIKRVSEHSHQGIKEFASEVKIISRLRHRNLVQLIGWCPKRKKLLLVYEYMPNGSLDVHLFKKQNLLGWTVRYNIARGLAAALLYLHEEWEQCVVHRDIKSSNIMLDSEFNAKLGDFGLARLVDHAKGAQTTALAGTPGYMAPECNTTWRATKESDVYSFGVVALEIACGRKPIKYKAPESEINIVEWVWGLYGSGRVLEAADERLDGDFVKEQMKCLMVVGLWCAHPCHNNRPSIRQAIQVLNFEAPLPTLPAKLPVPTYLDG 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03260 650 Pfam Legume lectin domain 20 264 IPR001220 GO:0030246
Adu03g03260 650 Gene3D - 18 272 - -
Adu03g03260 650 Gene3D Transferase(Phosphotransferase) domain 1 437 649 - -
Adu03g03260 650 CDD lectin_legume_LecRK_Arcelin_ConA 21 259 IPR001220 GO:0030246
Adu03g03260 650 PANTHER - 11 650 - -
Adu03g03260 650 Pfam Protein kinase domain 360 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03260 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 260 IPR013320 -
Adu03g03260 650 SMART serkin_6 360 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03260 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Adu03g03260 650 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
Adu03g03260 650 CDD STKc_IRAK 366 630 - -
Adu03g03260 650 SUPERFAMILY Protein kinase-like (PK-like) 345 638 IPR011009 -
Adu03g03260 650 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Adu03g03260 650 PANTHER RECEPTOR LECTIN KINASE 11 650 - -
Adu03g03260 650 Gene3D Phosphorylase Kinase; domain 1 345 436 - -
Adu03g03260 650 ProSiteProfiles Protein kinase domain profile. 360 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03260 Adu-Chr3 118961411 118968345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03260 1 647 Receptor kinase-like Gene Family AT5G10530 46.353 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Adu03g03260 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03260 - - gmx:100782344 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03260 03 118961411 118968345 Adu03g03260 03 118961411 118968345 ECH