Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03258 ATGGTTCAGTACTATTGTGAAAAGAATTTCTTGCTTGCTTCTTTCCATGTAATATTAGTTGCAAGTATTGCAACTATATCACATGCACAAGAACCACTAGCCTTCAACTACGATCAATTCGCAGACAGAGGAGATACCTTGTATACTTCCGGTGATGTCTATGATGATAATGGATCCCTTCAACTCACGGAGCAGAAGAAAGATAGCTTCGGCAGAGTCACATATTACAAACAGTTTCACCTTTGGGACAACACCACAGGCAGGGTCACAGATTTCACTACCCATTTCACTTTTTCCATCAACACCCCAAACAAATCCTACGATGGCGATGGCATCACCTTCTACCTAGCACAGCCCAGTTTGCCAGTCCCTGATCCAAGAGATGGCAGTGGCATTGGTCTCCTCAGCCGGTACAAGGATAATGTCACAAAAATTGAGCAGCACTTGTCTTGTGAAGTTAATCTGAGAAATGTTCTGCCAGAATGGGTTGAGTTTGGATTCACTTCAGCAACAGGGTTCTACTTTGAGTATCACACCCTCAGCTCATGGTCCTTCAACACTAGTTTGAGCACTCATGAAGCAAATGACCAGAATAGAAGCAAGAAAGGCTTGGTGATAGGGCTAGGTGTTGGTGCAGGTGTTTTAATATGTGTTTTAGTGCTGGCTAGTTTTATGGGATGGAAGCTGAGGAGCGGAAAAAGGAGAGACAGTTTTGATGTTGCTATGGACAGAGATTTTGAAAGAGGCACTGGACCCAGGAGGTTTTCTTATGAAGAACTTTCTAGAGCAACTAATAATTTTGCAAAGGGACATAAAATTGGAGAGGGAGGTTTTGGTGGAGTTTACAAAGGATTCTTAAGAGATTTGAACATTCATGTTGCCATTAAGAGGATATCTCAGGGATCACAACAAGGGGTGAGGGAGTATGCATCTGAAGTCAAGATTATTAGCCAACTGAGGCACAAGAATTTGGTTCAGCTCATTGGATGGTGTCACCAGAAGAATGACCTGCTGTTGATTTATGAGTTCATGGAAAATGGAAGCTTAGATTCCTATATATTCAAAGGTAAAAGCTTGTTGACATGGGAAGTAAGATATAACATTGCTAGAGGCTTGGCTTCATCTTTATTGTACTTGCATGAAGAGTGGGAACAATGTGTGCTTCATAGGGACATCAAACCCAGCAATGTTATGTTGGATCCTAATTTCAATGTGAAGCTTGGAGATTTCGGGTTAGCAAGACTGATGGACCACGGGACAGAATCGAAAACGGCGAGTTTAGCTGGAACAATGGGATATCTGGCTCCTGAAGCTGCCACAAGAGGTAAGGCAAGCAAAGAGTCAGATGTGTACAGTTTTGGAGTTGTTGCATTGGAGATAGCTTGTGGAAGAAGGATCATTGAACAAAATCTAATCGCAAATCAGATCCACTTGGTGGATTGGGTTTGGGAACTGTATCCCACAGGTAATCTTCAAGAAGCAGCGGATCCAAGATTATATGGTGTTTTTGATAAACAAGAAATGGAGAGGTTAATGATTGTTGGACTTTGGTGTACTCTAACTGATTACACTATGAGGCCTACAATAAGACAAGTGGTTCTTGTGCTTAACTCTGAAGTTCCGTTGCCCACTCTCCCATCACAGCTTCATTCTTCCAACTATTTCGTCCCAAGGACTAGTTCTGCTTCTGGAAATAACCAGAGCCAGCCTTCAACTTCAAGCAATAGCTCTCTCACCACGGGGTCTTCACCGTCTAGCAGCAGTGCAACTTCAGAATCCTCTAAACTTCTAGGAACATGA 1800 0.4261 MVQYYCEKNFLLASFHVILVASIATISHAQEPLAFNYDQFADRGDTLYTSGDVYDDNGSLQLTEQKKDSFGRVTYYKQFHLWDNTTGRVTDFTTHFTFSINTPNKSYDGDGITFYLAQPSLPVPDPRDGSGIGLLSRYKDNVTKIEQHLSCEVNLRNVLPEWVEFGFTSATGFYFEYHTLSSWSFNTSLSTHEANDQNRSKKGLVIGLGVGAGVLICVLVLASFMGWKLRSGKRRDSFDVAMDRDFERGTGPRRFSYEELSRATNNFAKGHKIGEGGFGGVYKGFLRDLNIHVAIKRISQGSQQGVREYASEVKIISQLRHKNLVQLIGWCHQKNDLLLIYEFMENGSLDSYIFKGKSLLTWEVRYNIARGLASSLLYLHEEWEQCVLHRDIKPSNVMLDPNFNVKLGDFGLARLMDHGTESKTASLAGTMGYLAPEAATRGKASKESDVYSFGVVALEIACGRRIIEQNLIANQIHLVDWVWELYPTGNLQEAADPRLYGVFDKQEMERLMIVGLWCTLTDYTMRPTIRQVVLVLNSEVPLPTLPSQLHSSNYFVPRTSSASGNNQSQPSTSSNSSLTTGSSPSSSSATSESSKLLGT 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03258 599 MobiDBLite consensus disorder prediction 556 599 - -
Adu03g03258 599 Pfam Protein kinase domain 268 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03258 599 PANTHER LECTIN RECEPTOR KINASE 20 139 - -
Adu03g03258 599 Gene3D - 31 142 - -
Adu03g03258 599 Gene3D - 143 203 - -
Adu03g03258 599 ProSiteProfiles Protein kinase domain profile. 267 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03258 599 Gene3D Phosphorylase Kinase; domain 1 252 343 - -
Adu03g03258 599 ProSitePatterns Legume lectins alpha-chain signature. 159 168 IPR000985 -
Adu03g03258 599 SUPERFAMILY Protein kinase-like (PK-like) 251 560 IPR011009 -
Adu03g03258 599 PANTHER - 149 567 - -
Adu03g03258 599 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 194 IPR013320 -
Adu03g03258 599 CDD STKc_IRAK 273 537 - -
Adu03g03258 599 Gene3D Transferase(Phosphotransferase) domain 1 344 557 - -
Adu03g03258 599 Pfam Legume lectin domain 34 140 IPR001220 GO:0030246
Adu03g03258 599 PANTHER - 20 139 - -
Adu03g03258 599 PANTHER LECTIN RECEPTOR KINASE 149 567 - -
Adu03g03258 599 ProSitePatterns Protein kinases ATP-binding region signature. 273 296 IPR017441 GO:0005524
Adu03g03258 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Adu03g03258 599 SMART serkin_6 267 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03258 Adu-Chr3 118933484 118935422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03258 149 554 Receptor kinase-like Gene Family AT5G10530 51.456 3.20e-143 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Adu03g03258 Pkinase 3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03258 - - mtr:MTR_4g093140 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03258 03 118933484 118935422 Adu03g03258 03 118933484 118935422 ECH