Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03254 ATGTTGCAGCTTTCTATTCAACGAGTGAAGAAGTTGAACATTTTGAGGCCGCAGATCTTTGCTTTGGGAAGTTCATATATGTCAACGGTTGCTCAGCCATCTGCCAGTAAGCGCAATCCGCAGAGGGTTCCAAATCTTATTGGAGGCAGTTTTGTTGACTCCAAATCATCATCTTTCATTGATGTCATAAACCCAGCAACCCAAGAAGTTGTTTCAAAACTTCCTTTGACTACAAATGAAGAGTTTAAAGCTGCTGTATCTGCAGCAAAAAAAGCATTTCCATCATGGCGTAACACTCCTATTACAACACGCCAGCGTGTGATGCTGAAACTTCAGGAGCTTATTCGTAGAGATATGGATAAACTTGCACTGAGTGTGACCACTGAACAAGGAAAGACGTTAAAGGATGCACAAGGAGATGTATTCCGTGGTTTAGAGGTTGTGGAACATGCTTGTGGGATGGCAACTCTACAAATGGGGGAATATGTTTCAAATGTAGCACATGGAATTGATACTTACAGTATTAGAGAACCACTTGGTGTCTGTGCTGGTATTTGTCCTTTCAACTTCCCTGCAATGATTCCCTTGTGGATGTTCCCAATTGCTGTTACATGTGGTAATACCTATGTTCTAAAGCCATCAGAGAAAGATCCAGGTGCTTCTATAATGCTAGCTGAATTGGCATTGGAGGCTGGTTTGCCGGAAGGTGTCCTAAATATAGTCCATGGAACACATGATATTGTGAATGCTATTTGTGATGATGACGACATCAAAGCCATATCCTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAATCTAATATGGGGGCCAAGAATCATGCCATTGTCTTGCCAGATGCAAATGTTGATGCTACTTTAAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGTACAGTTATTTTTGTTGGAGGCTCAAAACCTTGGGAAACTAAACTTGTTGAGCGTGCCAAAGCCCTTAAAGTAAATGCTGGAACTGAACATGATACTGACCTTGGTCCAGTCATCAGCAAACAGGCAAAGGAGCGGATACATAGATTAGTTCAATCTGGGGTTGACAGTGGTGCCAGACTACTGCTTGATGGAAGAAATATAGTGGTACCTGGATATGAGTCTGGAAATTTTGTTGGCCCAACCCTCCTATCCGATGTCAATGCCAACATGGAGTGCTACCAGGAGGAAATTTTTGGCCCAGTTCTTCTTGTGATGGAGGCTGAGAGCTTGGATGACGCCATAAACATTGTCAACCAAAACAAGTATGGTAATGGTGCTTCAATATTTACTACCTCGGGTGTTGCTGCAAGGAAATTTCAGACTGAGATTGAGGCTGGACAGGTTGGCATCAATGTCCCTATTCCGGTTCCTTTGCCCTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCAGGGGATCTCAATTTCTATGGCAAGGCAGGAGTTAACTTCTATACACAGATCAAAACAATAACTCAGCAATGGAAGGATTCTGCAGCTGGTGGTGGCAAGGTTAACTTGGCAATGCCTACCTCTCAAAAATCTTGA 1620 0.429 MLQLSIQRVKKLNILRPQIFALGSSYMSTVAQPSASKRNPQRVPNLIGGSFVDSKSSSFIDVINPATQEVVSKLPLTTNEEFKAAVSAAKKAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALSVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVAHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTYVLKPSEKDPGASIMLAELALEAGLPEGVLNIVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVLPDANVDATLNALVAAGFGAAGQRCMALSTVIFVGGSKPWETKLVERAKALKVNAGTEHDTDLGPVISKQAKERIHRLVQSGVDSGARLLLDGRNIVVPGYESGNFVGPTLLSDVNANMECYQEEIFGPVLLVMEAESLDDAINIVNQNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSAAGGGKVNLAMPTSQKS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03254 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 288 488 IPR016163 GO:0016620
Adu03g03254 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 28 539 IPR010061 GO:0004491
Adu03g03254 539 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 28 539 - -
Adu03g03254 539 SUPERFAMILY ALDH-like 39 520 IPR016161 GO:0016491
Adu03g03254 539 Pfam Aldehyde dehydrogenase family 51 515 IPR015590 GO:0016491
Adu03g03254 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 313 324 IPR016160 GO:0016491
Adu03g03254 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 496 IPR016162 GO:0016491
Adu03g03254 539 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 45 519 IPR010061 GO:0004491
Adu03g03254 539 CDD ALDH_F6_MMSDH 43 519 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03254 Adu-Chr3 118890270 118896032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03254 12 503 Aldehyde Dehydrogenase Gene Family AT2G14170 81.098 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03254 K00140 - gmx:100811544 966.837