LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g03230	ATGGTGTGCCAAGCAGCAAGCCAGACAAGATTTCGGGCATTGAAACATGAGAATGGCCTTGAAGGTGAATCAACAATTGTTGTTAGAGTTATAGCTTGCTTCCAACCGCTGCACTTTTGTCAGGCTGAGTACTTCCGTCATTTGCTTAAGCCCGTCACAGAAGCAGCAAGTCACTGGAGATCTAATCCGATATCTGGTGTACATAGCATTTACGGGTCGTTTGTTTCGTTGAATGACCCCAGCATACTTGGTATTCCAGCATGTTTAAATTCTACCACTCGCATCTTTCCTGCTGTCAATGCATTTCAAGGACCTGCAGCTCCTGCTATCCCGGGTCCAAAGACTGAGCCAACAGATGAGTTGAAACATTTCCTTCGGCATCCCATTGCAAAAACAGGTTTCAAAGAAGTGCATACTGGAGGGTCTTTGCAAAATGCAAATCCTGAATCTTTGCAGAGAAAATTCCTGATTTTTGACCGCTCTGGTAATAAGACACGAATGTTTTACGGTCCTGGCCTCCCTCATGTCCAGGGTCCAATTATTTCTGCTAGAGAATTTCCTCTAGCTTGTGATATAAATGAGAAGGGATGGACAAGTAGTATGCGTCAAAATGGTCTAGCCGATTGCAGTTTACCAAAAAAGTCTGATAATGATCATGTAGGTCATGAAGAAAGTGAAATGCATGAAGACACGGAGGAAATCAATGCATTGCTTTATTCTGATGATGATGACAGTGATTATAATGATTGTGATGATGACGAGGTAACAAGTACAGACCATTCCCCTTTGGTTACTAAAAGGACCTATGGTATGCAAGAACAATTTCAACACACAACTGAGGGGGTTGCTAGCTATGACTGGCCTAACAAAAGGCCGAAGTTAGTTGATGGTGGCTGCAATAGATCACCACAACCTGTGGACAGTTCCAGTTCGTTAAGACCAAATGAAAACCACGAGTGCATTAGTGATGCTGAATCACAGAATTCTTTTGGCGCTGAGAAAGTAGGTAAATCAATGGCAGGTGATTTTCAGTTGAAAAAGGACCAGATTCGGGAATTATTGAGAGTTCTTGAGAACTTGATTCCTGGTGCAAAAGGAAAGCAGCCACTTTTTGTCATTGATCAAACTATTGAGTACTTGAAATCTTTGGCGTCCAAAACTCAACACTTGGAGTAA	1176	0.4235	MVCQAASQTRFRALKHENGLEGESTIVVRVIACFQPLHFCQAEYFRHLLKPVTEAASHWRSNPISGVHSIYGSFVSLNDPSILGIPACLNSTTRIFPAVNAFQGPAAPAIPGPKTEPTDELKHFLRHPIAKTGFKEVHTGGSLQNANPESLQRKFLIFDRSGNKTRMFYGPGLPHVQGPIISAREFPLACDINEKGWTSSMRQNGLADCSLPKKSDNDHVGHEESEMHEDTEEINALLYSDDDDSDYNDCDDDEVTSTDHSPLVTKRTYGMQEQFQHTTEGVASYDWPNKRPKLVDGGCNRSPQPVDSSSSLRPNENHECISDAESQNSFGAEKVGKSMAGDFQLKKDQIRELLRVLENLIPGAKGKQPLFVIDQTIEYLKSLASKTQHLE	391

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g03230	391	MobiDBLite	consensus disorder prediction	295	325	-	-
	Adu03g03230	391	PANTHER	TRANSCRIPTION FACTOR SAC51	77	390	-	-
	Adu03g03230	391	MobiDBLite	consensus disorder prediction	210	231	-	-
	Adu03g03230	391	PANTHER	TRANSCRIPTION FACTOR BHLH145	77	390	IPR037546	-
	Adu03g03230	391	MobiDBLite	consensus disorder prediction	302	325	-	-
	Adu03g03230	391	MobiDBLite	consensus disorder prediction	212	231	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g03230	Adu-Chr3	118674331	118675885	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu03g03230	140	383	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT5G09460	37.066	4.57e-21	91.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g03230	-		-	gmx:100817942	332.028