Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu03g03177 | ATGACAGGAATATCAGAAGTGTTGTATCAGCTGTACGCTAAAGCAATAGTGCTATTAGCATACATGCTCATAGAACTTGTCCTTCTTATTCAGTATCTCAAATCAGACAAACGCAGCAGCACCACAATCACCACCACCCAGTATCTCAGATTCGTTGAAGAGAAGAACCCCACAATTCTCTACACCAAGAGCATGATGCAGCAACTGGATCCTGTTGAATGCAGAGTGTGCTTGAATGAGTTCCATGAAGGTGATCAATTGAGGAACCTCAAGTGTCACCACGCTTTTCATAGGGATTGTTTGGACAAGTGGTTGCAACAATCTTTTGCTACTTGCCCTCTTTGCAGGATCAAGCTGTTACCTGATTATGTTGTTGCAAAGTATCAGAATAATCACCATAATCATTATCAGCGCAATAATACTGAGGTGAAGAAGTTAAAGGACTTGTTGTGCACGAAAAAGAGCCACCTGGGCCCTGGCATGTTAATGCTGGAAAATACCGCCACCGTCAGTAGTGGTGGCTTGGCCACAATCGAAGAAGCACGACAGAACCAACCTCTGCAAGGATCGCCGTCAAGCTCCAATCCCTCTGAAAATCAATGCTGGCAGACACCCGAATTGCCGCCGCCTGCTAAATCCAACTCCGTGTTTGCAATGATGGTGGACACCTCAACACTTGGGCGCTTCCACCACCAAAGACTCGAATTCAAGCACTGTCTCCCCGCAATCATAACTTCCCACAGAACCTTCTTCACCGTCCTCTGGATCGCCGCCTTCGCCTCCGTCTTCATCTGGCAGAGGAACATTGTCGTCAGAGGCTTTTTCCTCTTCAGTTGGACCCTCCCGCTGCACCCGATTCCTAAGCTGAGGCCGGTGGCTTTCAACTTGACAGATTTCAGGGGTGTTGGCGATGGTGTCACCCTCAACATTGGGGCATTTGAGAGGGCCGTTTTTGCGATTTTCAAGTTGTGGAATAAAGGTGGTGGCCAGCTCAATGTGCCTCCCGGTCGCTGGCTTACTGCGCCCTTCAATCTCACCAGCCATATGACGCTTTTTGTAGTTCAAGATGCTGTTATTCTTGGACTTGATGTGAGTTGTTGA | 1101 | 0.4796 | MTGISEVLYQLYAKAIVLLAYMLIELVLLIQYLKSDKRSSTTITTTQYLRFVEEKNPTILYTKSMMQQLDPVECRVCLNEFHEGDQLRNLKCHHAFHRDCLDKWLQQSFATCPLCRIKLLPDYVVAKYQNNHHNHYQRNNTEVKKLKDLLCTKKSHLGPGMLMLENTATVSSGGLATIEEARQNQPLQGSPSSSNPSENQCWQTPELPPPAKSNSVFAMMVDTSTLGRFHHQRLEFKHCLPAIITSHRTFFTVLWIAAFASVFIWQRNIVVRGFFLFSWTLPLHPIPKLRPVAFNLTDFRGVGDGVTLNIGAFERAVFAIFKLWNKGGGQLNVPPGRWLTAPFNLTSHMTLFVVQDAVILGLDVSC | 366 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu03g03177 | 366 | SUPERFAMILY | RING/U-box | 64 | 124 | - | - | |
Adu03g03177 | 366 | PANTHER | - | 1 | 142 | - | - | |
Adu03g03177 | 366 | MobiDBLite | consensus disorder prediction | 183 | 210 | - | - | |
Adu03g03177 | 366 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED | 1 | 142 | - | - | |
Adu03g03177 | 366 | Pfam | Ring finger domain | 73 | 116 | IPR001841 | - | |
Adu03g03177 | 366 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 34 | 121 | IPR013083 | - | |
Adu03g03177 | 366 | SUPERFAMILY | Pectin lyase-like | 278 | 361 | IPR011050 | - | |
Adu03g03177 | 366 | SMART | ring_2 | 74 | 115 | IPR001841 | - | |
Adu03g03177 | 366 | Gene3D | - | 290 | 365 | IPR012334 | - | |
Adu03g03177 | 366 | ProSiteProfiles | Zinc finger RING-type profile. | 74 | 116 | IPR001841 | - | |
Adu03g03177 | 366 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 73 | 116 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu03g03177 | Adu-Chr3 | 117285406 | 117291018 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu03g03177 | 228 | 363 | Glycoside Hydrolase | AT1G19170 | 57.143 | 4.54e-44 | 157 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu03g03177 | - | - | lja:Lj5g3v1749290.1 | 222.631 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu03g03177 | 03 | 117285406 | 117291018 | Adu03g03177 | 03 | 117285406 | 117291018 | ECH | |
Adu03g03177 | 03 | 117285406 | 117291018 | Adu10g00947 | 10 | 15756527 | 15756862 | PCT |