Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03171 ATGAATTCTCCAACTTCACACTTTGTTCCCCCAAGAAGGATGGGAGTATATGATCCAATCCACCAGATTAGTATGTGGGAAGAGAATTTCAGAAGTAATGTTAGTTTAAGTGCATCAACGCTCTTAATTGATGACGCGGAGATTAAGTTTGACAATCAGTCAGAATATGCTTCTCATGGAATACCAGGAACATCTAAACAATATGACCAAGAAGCTAACAGACTTGCTGATAAGATACAGAGACGCCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTTTGCGCAAAAAGGCCTATGTACAGCAACTAGAATCATGTCGTGTGAAGCTAATGCAGTTAGAGCAAGAGGTTGATCATGCAAAACAACAGGGATTACATATTGGTGGTACTGGATTGGGTTCTAATAGTTTGGGTTTTGCTGCCTCTTTAAATTCAGGAATAACAAACTTCGAGATGGAGTATGGACGTTGGCTAGAAGAGCGGAATAGACATACCTTGGCACTTAGAAATGCTTTAAGTTCTCATATGGGTGACGTAGAACTCGGAGAACTTGTAGATGGCACAATGAACCACTATTTTAAGCTCTTTGGCATGAAATCTGCTGCTGCAAAAGCTGATGCTTTCTACGTTATGTCCGGCATGTGGAAATCATCAGCCGAACGATTTTTCTTCTGGATTGGAGGCTTTCGCCCCTCAGAAATTCTAAAGATTCTGGTCCCTAGGATTGAAACCATGACAGAGCAACAAAGATCAGACATAAGCAACCTTGGAAAATCTTGTCAGCAAGCAGAAGATGCTCTTTCACAAGGCATGGACAAACTTCAACAAATGGTTTCAGAATCTGTAGCAGCAGGACAACTTGAAGAACAAACTAACACTCCAAACATGTCTACTGCAATGGAGAGATTGGCAGCTCTAGTGAGCTTTGTGAACCAAGAAACATTGCTGCAAATGTCTCGAATACTTACAAAACGGCAGGCTGCGAGGTGGCTTCTTGCCTTGGGGGAATATTTTCAACGCCTGCAAGCTTTGAGCTCTTTCTGGGCTAATCGTCCTCCCAAACCTGCTGAGTGCTTAATACCTTAG 1089 0.4252 MNSPTSHFVPPRRMGVYDPIHQISMWEENFRSNVSLSASTLLIDDAEIKFDNQSEYASHGIPGTSKQYDQEANRLADKIQRRLAQNREAARKSRLRKKAYVQQLESCRVKLMQLEQEVDHAKQQGLHIGGTGLGSNSLGFAASLNSGITNFEMEYGRWLEERNRHTLALRNALSSHMGDVELGELVDGTMNHYFKLFGMKSAAAKADAFYVMSGMWKSSAERFFFWIGGFRPSEILKILVPRIETMTEQQRSDISNLGKSCQQAEDALSQGMDKLQQMVSESVAAGQLEEQTNTPNMSTAMERLAALVSFVNQETLLQMSRILTKRQAARWLLALGEYFQRLQALSSFWANRPPKPAECLIP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03171 362 Pfam Seed dormancy control 168 240 IPR025422 GO:0006351|GO:0043565
Adu03g03171 362 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 357 - -
Adu03g03171 362 Coils Coil 97 124 - -
Adu03g03171 362 Gene3D - 76 127 - -
Adu03g03171 362 ProSiteProfiles DOG1 domain profile. 148 352 IPR025422 GO:0006351|GO:0043565
Adu03g03171 362 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Adu03g03171 362 SUPERFAMILY Leucine zipper domain 78 119 IPR046347 GO:0003700|GO:0006355
Adu03g03171 362 Pfam bZIP transcription factor 77 112 IPR004827 GO:0003700|GO:0006355
Adu03g03171 362 PANTHER TRANSCRIPTION FACTOR TGA9 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03171 Adu-Chr3 117134364 117137093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03171 1 357 Calmodulin-binding Proteins AT5G65210 60.434 2.85e-160 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu03g03171 DOG1 1.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03171 K14431 - gmx:100780003 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03171 03 117134364 117137093 Adu03g03171 03 117134364 117137093 ECH
Adu03g03171 03 117134364 117137093 Adu10g00964 10 16499241 16502617 PCT