Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03130 ATGCGGTTTGAGCATTTGAAGCTGGCCCAAGATTTTTATGCAAGCTACGCAAAGAAAGTTGGCTTCATAAGTAAGATACGAGCCATAAATTTTGACAGGATGACAAAGCAACTGATCAACCAATCTATCTATTGCAATCGGGAGGGTTTTCGCGGGTCTCGTGTCAAAGCACCCACACAGAAGAACACGATTGCAGCTGTGGAGTGTAGAGCAAGAATATATGCAAAGTTTGACAGGAAAAAGCAAGATTGGATCTTGTTGAAGGTTAAACTAAATCACTCGCACCTGTGTTCAACTAAGAAGGTGGTGCACTACCACGAGAATAGGGAGTTGACAATGCATGCAAAGTGCATCATTAAGGTTAATGATGAGGCGGGCATTCGACCCAACAAGACCTTTCTAGCATTGGCCAATAAAGTTGATGTCAAGGAGATGTTGAATTACTTCATGCGAATGAAGGAGTTAAATCCGAACTTCTTTTACGCAGTGAATGTGGGTGATGATTATAAGTTTACGAGTGCAATTTGGGTGGATGTAAGGTGTAGGGCGTCTTATGAATACTATGGAGACGTGGTGTCATTTGTTACCACATATAGCACGAACCGGCATGGATTGTCGTTCACTACTTTCATTGGTGTGAACCACCATGGTAAGTCTACTTTGCTAGGCTGTGCTCTGCTAAGCAGCAAAGAGATCCTCAGTTTTGAGTGGGTGTTCACACAATGGCTGAAGTACATGGGAACTACACCGCAGGGCATCATCACAGACCAATTGTTTGGTGCAATTAAGAAGGTCCTCCCCAATACACGACACCGTTGGTGCATATGGCATATAACAAAAAAAAAAATACAGAATAAGCTTGGAGGTCATGCTAGATTCAGAGAGTTGAATGCTGAGTTGAATCACATTATATGGAACTCTCGGTCGGTTGAGGATTTCGAGGATCATTGGGCTGAGTTCATTGATGAGTTCAACTTACATCACAACAGATGGCTATCAGctattgagagacaatttccacaagagtacaccaacgagatgtttagggatgtccaaacggagtttgtcaagaaggctgattgcaCTATTCGTGCCATGTATGAACATGGTGACTTGGCTTGGGTAAAGGTGGAAGAGGAAATAGTAGTCTATGAGACGACCTGGTATGTTACGTACGATGTCCATTTTGACCATTCGACTCACGCAGTTCGATGTGAGTGCAACTTGTTCAAGAGTGTAGGTATATTATGTTACCACTGTCTTGTAGCACTTTCATCTTACAAAGTGAATGAGGTACCTTCCTGCTATGTTCTACCTCGTTGGAGAAAGAACATAAAGCGTAAGCACACCTACATTAAGAGTAGTCACGATGTTAGACGTTTAGATGAAAGCCACAACATATTCAGAGGGTTGTGTGCACATTTCTACAACGTTGCACAGGAATTTGTGGATTGTGACGATGAAGCAGACATGTTACATGCTGCTCTGGATGATGCAAGGGCCAAGCTAGTAGATTACCGTGCCAGGATGCGGAATAAGACCGTCGCCAATGCACACAATAACATCGCCACAGACACTTTCAACCGTGTTCGGCATAGAGGACATTCAGGCCCCATCAAAGGTAACCACAAAGGGTCGTTCAAAATGTAA 1650 0.4109 MRFEHLKLAQDFYASYAKKVGFISKIRAINFDRMTKQLINQSIYCNREGFRGSRVKAPTQKNTIAAVECRARIYAKFDRKKQDWILLKVKLNHSHLCSTKKVVHYHENRELTMHAKCIIKVNDEAGIRPNKTFLALANKVDVKEMLNYFMRMKELNPNFFYAVNVGDDYKFTSAIWVDVRCRASYEYYGDVVSFVTTYSTNRHGLSFTTFIGVNHHGKSTLLGCALLSSKEILSFEWVFTQWLKYMGTTPQGIITDQLFGAIKKVLPNTRHRWCIWHITKKKIQNKLGGHARFRELNAELNHIIWNSRSVEDFEDHWAEFIDEFNLHHNRWLSAIERQFPQEYTNEMFRDVQTEFVKKADCTIRAMYEHGDLAWVKVEEEIVVYETTWYVTYDVHFDHSTHAVRCECNLFKSVGILCYHCLVALSSYKVNEVPSCYVLPRWRKNIKRKHTYIKSSHDVRRLDESHNIFRGLCAHFYNVAQEFVDCDDEADMLHAALDDARAKLVDYRARMRNKTVANAHNNIATDTFNRVRHRGHSGPIKGNHKGSFKM 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03130 549 ProSiteProfiles Zinc finger SWIM-type profile. 392 428 IPR007527 GO:0008270
Adu03g03130 549 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 333 IPR031052 GO:0006355
Adu03g03130 549 Pfam FAR1 DNA-binding domain 11 97 IPR004330 -
Adu03g03130 549 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 335 508 IPR031052 GO:0006355
Adu03g03130 549 PANTHER OS03G0843700 PROTEIN 335 508 - -
Adu03g03130 549 Pfam MULE transposase domain 192 281 IPR018289 -
Adu03g03130 549 PANTHER OS03G0843700 PROTEIN 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03130 Adu-Chr3 116289542 116291697 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g03130 MULE 1.6e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03130 - - ahf:112733025 644.039