Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03117 ATGGGTTGCGTTAATGGTAAGTTAGATTCTCCCATTCAAGAACGCCGCTTAAACAGATTGAAAAAGGAGTACGCTTATGCCAATCCCAAACTAACTTCATCTTCTTCTACGTCAACCATGAAACTAAAAAGCTACGATAACCATAGTTCTAACAGAAAAGTGAGCGTTAGTCATCCCAAAGATAATTACAGTAAGTTAAGGACTGGTGGCTATAGATATACAGATAAGGAAAAGGAAAAAACAGGGAAAAAGAAAACGGAAAAGGCTGTTGCTGCTAATGACATTGGTAAGTTGATGGAGGAAGAATCTAAGTTGTCCGAAGACAATATGAAAAAGAAAAATAAATTTGCAGGGTATGAAGTCGGTGAAGGTTGGCCCAAATGGTTGGCTGATAATATCCCTAAAGAGGTTTTGTCTGCTTTGGTTGCCAAGAGCGCTGACTCCTATGAAAAACTTGACAAAATTGGACGTGGAACATATAGCAATGTCTACAAAGCCCGTGATAAGGATACTGGAAAGATTGTTGCTCTGAAAAAAGTTCGTTTTGATACATCCGATTCTGAAAGTATAAAATTCATGGCGAGAGAGATTATGATACTGCAAAAGCTGGATCATCCCAATGTCATCAAGCTTAGAGGATTGGCAACATCTAGGATGCAATATAGTCTTTATCTCGTCTTTGATTATATGCAATGTGATCTTTCCAGAATTATCTCTCGTCCTGATGAGAGACTCACTGAGCCTCATATCAAGTGTTACATGCAACAATTGCTTGCTGGGCTCCAACATTGTCATGAGAGGGGAATTATTCACCGAGATATCAAATCTTCGAACTTGCTAATAGATAGAAGAGGTTCTTTAAAAATAGCAGATTTTGGTCTTGCAAATGTTAAACATCAAGGCCCTCTTACAAATCGAGTGGTGACACTTTGGTATAGGGCTCCTGAACTCCTCTTAGGTTCGACTGATTATGGATATAACATTGATCTATGGAGTGCTGGATGCTTGTTGGCTGAGATGTTTGTTGGAAGACCATTCATGCCCGGAAGGACAGAGGTTGAGCAGCTTCACCTGATTTTCAAACTATGCGGGTCTCCTCCAGAAGATTATTGGATAAAAATGAAGCTAAGATCAAGCTTCTTGCCCTCACAACATTACAAACCTAATTATGAGGACTACTTCCAAGGCTTTCCTTCCTCTTCATTGGATCTCTTGACCACACTTCTTCATCTTGACCCTGCATGTCGTGGCAGTGCTGCCTCTGCTCTTGAAACTGAATTCTTCAAAACTAGTCCATTAGCCTGTGACCCTTCAACCTTACCAGTGATCTACAAAGAAGAGGATGAACGCTCACATAAGAGACGCAAAAGACGCAAAGGTCACAATAACAAAGGGCAAATATCTTCTAAAACAAGGACAACTGGCACAAATGTATCAGAGAAGAACCAAACTGCTGAACAATCTTCAAAGGAACAGAAGATACAAGTTGAAGAAAAAGGAAGTAGCATAAACACATCATTACAGTTGATAGAGGAAAAAAGCATGAATACATCAACATCAATGTCCCCGATATTTCTTTCTACAGAAAGAAAATCACCAAAAACAGAGGGCCATCCTAATGCTCTTAAGAACATCAAGAATTACACTCTCTTACAGGCCTCTTTCGATATCATGAATAGAAATGAAGGCAACGAACTTGGTCCATTGCGTAGGTCCTTTTCTGCATTGGAATTTCGCCTTGACCATCTTGAGAAGCTTTCAAGTCTCTATGGACCAAACAAGAACTTAGGCCTTGGAATTTAA 1803 0.3971 MGCVNGKLDSPIQERRLNRLKKEYAYANPKLTSSSSTSTMKLKSYDNHSSNRKVSVSHPKDNYSKLRTGGYRYTDKEKEKTGKKKTEKAVAANDIGKLMEEESKLSEDNMKKKNKFAGYEVGEGWPKWLADNIPKEVLSALVAKSADSYEKLDKIGRGTYSNVYKARDKDTGKIVALKKVRFDTSDSESIKFMAREIMILQKLDHPNVIKLRGLATSRMQYSLYLVFDYMQCDLSRIISRPDERLTEPHIKCYMQQLLAGLQHCHERGIIHRDIKSSNLLIDRRGSLKIADFGLANVKHQGPLTNRVVTLWYRAPELLLGSTDYGYNIDLWSAGCLLAEMFVGRPFMPGRTEVEQLHLIFKLCGSPPEDYWIKMKLRSSFLPSQHYKPNYEDYFQGFPSSSLDLLTTLLHLDPACRGSAASALETEFFKTSPLACDPSTLPVIYKEEDERSHKRRKRRKGHNNKGQISSKTRTTGTNVSEKNQTAEQSSKEQKIQVEEKGSSINTSLQLIEEKSMNTSTSMSPIFLSTERKSPKTEGHPNALKNIKNYTLLQASFDIMNRNEGNELGPLRRSFSALEFRLDHLEKLSSLYGPNKNLGLGI 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03117 600 Pfam Protein kinase domain 149 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03117 600 PANTHER CELL DIVISION PROTEIN KINASE 94 535 - -
Adu03g03117 600 Gene3D Phosphorylase Kinase; domain 1 137 231 - -
Adu03g03117 600 MobiDBLite consensus disorder prediction 513 529 - -
Adu03g03117 600 MobiDBLite consensus disorder prediction 26 68 - -
Adu03g03117 600 SMART serkin_6 149 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03117 600 PANTHER CYCLIN-DEPENDENT KINASE 94 535 - -
Adu03g03117 600 MobiDBLite consensus disorder prediction 466 490 - -
Adu03g03117 600 ProSiteProfiles Protein kinase domain profile. 149 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03117 600 SUPERFAMILY Protein kinase-like (PK-like) 144 434 IPR011009 -
Adu03g03117 600 MobiDBLite consensus disorder prediction 513 541 - -
Adu03g03117 600 MobiDBLite consensus disorder prediction 28 52 - -
Adu03g03117 600 MobiDBLite consensus disorder prediction 445 501 - -
Adu03g03117 600 Gene3D Transferase(Phosphotransferase) domain 1 232 469 - -
Adu03g03117 600 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Adu03g03117 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03117 Adu-Chr3 115900689 115903189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03117 143 459 Core Cell Cycle Gene Families AT5G10270 47.337 1.06e-99 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Adu03g03117 Pkinase 1.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03117 K08819 - gmx:102667260 657.907