Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03116 ATGGCCTCTTGGGAGAGTAACAACGGTAAAAACATGAACGTAGCTTCGGATACTAATCATAGTGGTAGCAAAAGCAACGAAAAGAAGCGATCATCATCAATCGATGATGGCAATATTGTTGTAGAGAACGTAGACACATTCAGAATAGATTGCAAATGCAGCAGGTCAGAGTGCAAGAATAAGTGTTGTCTTTGCTACAGGTTTGGAGTTGGTTGCTCTCTTCGGTGTAGATGTAAGAGTTGCAAGAATATGTACGGAATCAAAGACTCCTCTTCGGTCGCAAAGGAACAAGAACATGCTAATGATCAAGAACGTGATAATAATGATGATAATGGCCGCAAGAACGAGGGAACAACGGATAATGGATCAATCAATGATGGCAATAGGGGATGCATCTGCAAAAAGAAGAATAAGGATTATGTGAACGAGACAAAGAAGGAAATAGAGTTGCGTAATCCACGGGGGTTTGAACCCAAGACTACTGTTGTTGAGAACGTAGCAAGACGCAGCAAAGGTTGCATCTGCGGAAAGATTATGTGCAAGGAATATTATTGTGGTTGCTTCAGATATAAAGTTGGTTGCTCTCTTCAGTGTGGATGTGCGAATTGCAGCAATCCATATGGAACCAAAGCCTCCTCTTCTGTCGCAAAGGAGCAAGAACGTGCTAATAATGGCAGCAACAACGAGGGAACAACAGTTAATGGATCATCTCCTGAATCCCATCATCCAGTTGTCGACGACAATGGCTTAACTCAGGAAGACCAGAAGGATTATTATCGACCGCAAATGTTACTGGCCAGAGAGAATGAATTCCACAATATGCCAATGCCATCAAATCAAGTTGTGCCTGTCAGGAGAAAAGGACCTGCTGCCGCTGCTAATTATTATTATTATTATTATTATTATCGTGTTTTTCAAAACCGTGGTGATGCACCTCATTATCAGCCTCTAACCCCGCCGCAGATTTCGAGCGTCCGAAACATTACTGAGCAGCAGAATGCTAACATGCTTGGGGAACCTAGTTGGCAGGGACAATCTTTCCAGAGGCCTCTTCGTATCTATTACGATAATTCTGCAGGGCCCTCATCAGTTCAGAGTAGTCAGCAGTATCAACCTCAGCAGAGTTATGGTTCTCATCAACAAGTAGAAGCACCACCAAGTGCAATGACTTGGCAACGTCTATTCCAGCCAAATAAAAATGATGCAACAAACATGCAAGCGTGCCACCCTCATCCTCACCTTCATGGCCATGGGCCATCTTCTAAGTTTCTACAGTAG 1278 0.4335 MASWESNNGKNMNVASDTNHSGSKSNEKKRSSSIDDGNIVVENVDTFRIDCKCSRSECKNKCCLCYRFGVGCSLRCRCKSCKNMYGIKDSSSVAKEQEHANDQERDNNDDNGRKNEGTTDNGSINDGNRGCICKKKNKDYVNETKKEIELRNPRGFEPKTTVVENVARRSKGCICGKIMCKEYYCGCFRYKVGCSLQCGCANCSNPYGTKASSSVAKEQERANNGSNNEGTTVNGSSPESHHPVVDDNGLTQEDQKDYYRPQMLLARENEFHNMPMPSNQVVPVRRKGPAAAANYYYYYYYYRVFQNRGDAPHYQPLTPPQISSVRNITEQQNANMLGEPSWQGQSFQRPLRIYYDNSAGPSSVQSSQQYQPQQSYGSHQQVEAPPSAMTWQRLFQPNKNDATNMQACHPHPHLHGHGPSSKFLQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03116 425 MobiDBLite consensus disorder prediction 214 253 - -
Adu03g03116 425 MobiDBLite consensus disorder prediction 92 123 - -
Adu03g03116 425 ProSiteProfiles CRC domain profile. 47 208 IPR005172 -
Adu03g03116 425 MobiDBLite consensus disorder prediction 92 116 - -
Adu03g03116 425 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 51 108 - -
Adu03g03116 425 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 129 242 - -
Adu03g03116 425 MobiDBLite consensus disorder prediction 355 425 - -
Adu03g03116 425 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 171 205 IPR005172 -
Adu03g03116 425 SMART CXC_2 46 87 IPR033467 -
Adu03g03116 425 SMART CXC_2 168 209 IPR033467 -
Adu03g03116 425 MobiDBLite consensus disorder prediction 1 21 - -
Adu03g03116 425 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 51 108 IPR044522 GO:0003700
Adu03g03116 425 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 129 242 IPR044522 GO:0003700
Adu03g03116 425 MobiDBLite consensus disorder prediction 214 241 - -
Adu03g03116 425 MobiDBLite consensus disorder prediction 355 405 - -
Adu03g03116 425 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03116 Adu-Chr3 115823603 115825197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03116 51 98 CPP Transcription Factor Family AT3G22760 50.000 6.27e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Adu03g03116 TCR 9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03116 - K21776 ahf:112771246 121.324