Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03104 ATGGACGGATCGTTTGTGCCTAGAAACAACATTGAAGCGGCTATACTTCTTTTAATGATTTTGCTAAGAAAAGTCGCTCTAAATAGAATTGAGTGGGATCCTTCAATTTTGGACCACCTTTCATTTGCTCTATCTGTTTCTGGAGATTTGATGATTTTAGCCAATCAATTGGAAGAATTGCTTCCTGGAACTATCCATCGAAAGGAGAGGTTCCATGCTTTAGCTCTTTGTTATTACGGAGCAGGGAAGAACGTGGAAGCGCTGGATCTTCTTAGAAAACTGCTGAGTAATAGAGAGGACCCAAGACATGTTCCAAGTTTGTTAATGGCTTCTAAGATTTGTTGCGAGAACTTCAGTGTTACAAAAGACCCTGGGGTAAGCTTTGCTCGGATGGCACTTGAGAACTTGGATGGAAGATGTAATCAGTTAGAAAATATGGCCAATTTCTTACTTGGTGTTTCACTTTCTGCATACTCAAAATTGGCCATTTCTGATGCTGAGATGGTTAAGAGACAATCTGAGGCACTTCATACCCTTGAAACTGCCTGCAAATTGAGCAGAATGGAAGACCCTGTTGTATTATACCATCTGAGTTTAGAATACGCTGAGCAACGGAAGTTGGATGCTGCACTTCATTATGCTAAGTGCATTGTAAAACTTGAAGTTGGCTCTAATGTTAAAGGTTGGTTACTGTTATCTAGGGTATTATCCGCACAAAAGCGGTTCTTAGATGCCGAATCTATTATCAATGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGTGATTTGTTACGAACAAAGGCGAAACTTCAGATCGCTCAGGGCCAGTTAAATAGTGCCATTGAGACATACACTCAGCTTCTTGCTGTTCTTCAAGTTCATAGTAAAAGTTTTGGTTCTCGGAATAAGCTATTTAAGGACAAAAGAGATCAGATTAGGAATTTGGAAGTTGAAGTATGGCATGATCTTGCTTATGTATACATCAGCCTTTCACAATGGCGTGACGCAGAGGCCTGCCTTTCAAAATCTCGGGCCATCAAACTATACTCTTCTACTAGATGTCATGCAATAGGGTAA 1080 0.4056 MDGSFVPRNNIEAAILLLMILLRKVALNRIEWDPSILDHLSFALSVSGDLMILANQLEELLPGTIHRKERFHALALCYYGAGKNVEALDLLRKLLSNREDPRHVPSLLMASKICCENFSVTKDPGVSFARMALENLDGRCNQLENMANFLLGVSLSAYSKLAISDAEMVKRQSEALHTLETACKLSRMEDPVVLYHLSLEYAEQRKLDAALHYAKCIVKLEVGSNVKGWLLLSRVLSAQKRFLDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLNSAIETYTQLLAVLQVHSKSFGSRNKLFKDKRDQIRNLEVEVWHDLAYVYISLSQWRDAEACLSKSRAIKLYSSTRCHAIG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03104 359 PANTHER PROTEIN NPG1 1 359 IPR043376 -
Adu03g03104 359 SMART tpr_5 68 101 IPR019734 GO:0005515
Adu03g03104 359 SMART tpr_5 226 259 IPR019734 GO:0005515
Adu03g03104 359 SMART tpr_5 318 351 IPR019734 GO:0005515
Adu03g03104 359 SMART tpr_5 262 295 IPR019734 GO:0005515
Adu03g03104 359 SMART tpr_5 191 224 IPR019734 GO:0005515
Adu03g03104 359 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 359 - -
Adu03g03104 359 Gene3D Tetratricopeptide repeat domain 8 353 IPR011990 GO:0005515
Adu03g03104 359 SUPERFAMILY TPR-like 170 347 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03104 Adu-Chr3 115527529 115528699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03104 2 359 Calmodulin-binding Proteins AT4G28600 55.647 5.66e-122 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03104 K21843 - gmx:100800762 551.592