Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03084 ATGATTTCAGCTATTTCGTGGATACCGATAGGTGCTTCGAAGGCGGAACCCACAATAGCTGAACCTCCTTCCAAGGAAGAAATTCAAGATATAATCACCACCGCCGCCGCCAGTACAGCAGACAGTGAAAATGAGGAAGAAGCAGGGGATGAACGCATGGATGATGCCGGTGGTGCCGTTGATGAAGTTGTGCGAGCACTCAATGTTGCTGATGCTCTCGGGAAGGCTGATAAATTGGACGATATTGCCCTCGGTTTGAAGGAGCTTGACATGGAACGTTACGATGATGAAGATGAAGGAGTTGAGGTATTTAGTTCCGGGATTGGTGATCTTTATTATCCAAGTAACGACCTGGATCCTTATATTAAAGATAAGAACGATGATGATGACTCTGAGGAACTCGAAGACATGATTATTAATCCAACTGATTCCGTCATTGTTTGTGCTCGTACTGAGGATGATCTCAGTCTTCTCGAGGTTCATATACTTGAGGACGCCGGTACTAGTGAGATGAACATGTATGTCCATCATGATATCATAATTCCTGCATTTCCACTATCCACAGCGTGGCTTGACTGCCTTCAAGGAAGAGAGAAAGGAAACTTCTTAGCTGTTGGTTCAATGGAACCGTCAATAGAAATTTGGGACCTTGATGTTATTGATGCAGTGCAGCCATGCATGGTTTTAGGTGGCATTTCAGAGAAAAAGAAGAAGGGGAAGAAGAAATCAATCAAATACAAAGATGACAGTCACACTGACTCTGTACTTGGTCTTGCCTGGAACAAAAAGATCAGGAATGTACTTGCTAGTGCCAGTGCTGACAAGCGAGTCAAGATTTGGGATGTGGCTACTGGGAAGTGTGAGAGTACAATGGAGCATCACTCAGACAAGGCAAGTACAGTTGCTTGGAATCATCATGAACCAAAAATTCTTCTTAGTGGTTCATTTGATCATACTGTGATCCTGAGGGATGGAAGGATGCCATCCCATCCTGGTTATAAGTGGTCAGTCACAGCTGATGTCGAGAGCTTGGCCTGGGATCCACACACTAACCACGATTTTGTGGTGTTGAGTCTCGAGGATGGTACTGTCAAGTGTTTTGATGTTCGGACCGCAATGTCTGAATCCACATCTGATCTAAGTTCTACATTTACTCTTCATGCACATGACAAAGCTGTTACCTCAGTATCCTATAATGTGTCAGCACCTAATCTACTTGCTACTGGATCGATGGACAAAACGGTAAAGCTTTGGGATTTATCGAACAACCAACCATCTGTTGTGGCATCTAAAAACTCCAATGCTGGAGCTGTATTTTCTATTTCGTTTTCAGAGGACAACCCCTTTGTGTTGGCTATAGGAGGCTCAGAGGGAAAATTGCAAGTTTGGGACACTTTATCTGAGTCTGCTGTCTCTCGGCGTTATGAAAATTACAACAAGAATAGAACTCGGTCGTGA 1458 0.439 MISAISWIPIGASKAEPTIAEPPSKEEIQDIITTAAASTADSENEEEAGDERMDDAGGAVDEVVRALNVADALGKADKLDDIALGLKELDMERYDDEDEGVEVFSSGIGDLYYPSNDLDPYIKDKNDDDDSEELEDMIINPTDSVIVCARTEDDLSLLEVHILEDAGTSEMNMYVHHDIIIPAFPLSTAWLDCLQGREKGNFLAVGSMEPSIEIWDLDVIDAVQPCMVLGGISEKKKKGKKKSIKYKDDSHTDSVLGLAWNKKIRNVLASASADKRVKIWDVATGKCESTMEHHSDKASTVAWNHHEPKILLSGSFDHTVILRDGRMPSHPGYKWSVTADVESLAWDPHTNHDFVVLSLEDGTVKCFDVRTAMSESTSDLSSTFTLHAHDKAVTSVSYNVSAPNLLATGSMDKTVKLWDLSNNQPSVVASKNSNAGAVFSISFSEDNPFVLAIGGSEGKLQVWDTLSESAVSRRYENYNKNRTRS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03084 485 ProSiteProfiles Trp-Asp (WD) repeats profile. 248 290 IPR001680 GO:0005515
Adu03g03084 485 MobiDBLite consensus disorder prediction 36 57 - -
Adu03g03084 485 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 386 424 - -
Adu03g03084 485 SMART WD40_4 239 281 IPR001680 GO:0005515
Adu03g03084 485 SMART WD40_4 328 368 IPR001680 GO:0005515
Adu03g03084 485 SMART WD40_4 379 419 IPR001680 GO:0005515
Adu03g03084 485 SMART WD40_4 284 324 IPR001680 GO:0005515
Adu03g03084 485 SMART WD40_4 177 216 IPR001680 GO:0005515
Adu03g03084 485 SMART WD40_4 424 464 IPR001680 GO:0005515
Adu03g03084 485 ProSitePatterns Trp-Asp (WD) repeats signature. 268 282 IPR019775 -
Adu03g03084 485 Pfam WD domain, G-beta repeat 383 419 IPR001680 GO:0005515
Adu03g03084 485 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 477 - -
Adu03g03084 485 ProSitePatterns Trp-Asp (WD) repeats signature. 406 420 IPR019775 -
Adu03g03084 485 Gene3D - 333 480 IPR015943 GO:0005515
Adu03g03084 485 Gene3D - 86 330 IPR015943 GO:0005515
Adu03g03084 485 PRINTS G protein beta WD-40 repeat signature 268 282 IPR020472 -
Adu03g03084 485 PRINTS G protein beta WD-40 repeat signature 406 420 IPR020472 -
Adu03g03084 485 PRINTS G protein beta WD-40 repeat signature 451 465 IPR020472 -
Adu03g03084 485 SUPERFAMILY WD40 repeat-like 199 470 IPR036322 GO:0005515
Adu03g03084 485 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 248 286 - -
Adu03g03084 485 PANTHER PERIODIC TRYPTOPHAN PROTEIN 1 1 477 IPR044285 GO:0006364
Adu03g03084 485 Pfam Anaphase-promoting complex subunit 4 WD40 domain 247 305 IPR024977 -
Adu03g03084 485 ProSiteProfiles Trp-Asp (WD) repeats profile. 431 473 IPR001680 GO:0005515
Adu03g03084 485 ProSiteProfiles Trp-Asp (WD) repeats profile. 386 428 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03084 Adu-Chr3 115241150 115244559 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03084 265 464 U-box Gene Family AT2G33340 31.100 1.13e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03084 K14791 - gmx:100807947 695.271