Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03083 ATGCGGGCAGTATATTTGAAAGGGCCTTGTAAGGCTCCTATTGAGCTTTATGTTGATGGAACAGTTATAGCACCAATGAACCCTCGTGGTGTTGGCGATGAATGGCAATGGGTTAAGGTTCAATATGTTGATTACTTCACCCTATCTGGCAATGGTGTTTTTGATGGTCAAGGTGCAATTGCTTGGCAACAAAATGATTGTGGAACCAACCTCAATTGTGCTAGGACTCCAATGAATTTTGGCTTCAACTTCATGAAACATGCAGTTGTTAGGACAATAACATCAAAGGATAGCAAGAACTTTAATGTGAATGTACTGGGGTGCCAAAACTTCACCTTTGATGGGTTCAAGGTCATTGCACCAGGGAACAGCCTAAACACAGATGGTATCCACTTGGGAAGATCAAATGGAGTGAGGAGTCTGAACACAGACATAGCGGCCGGAGACGATTGCATATCGATCAGTGATGAAAGCGTGAACACATACATCTACAATGTGAAGTGTGGACCTGGCCATGGCATCAGTGTTGGAAGCCTTGGCAAGTACACCACTGAGGCTCCTGTGGATGGTCTTATTCTCAAGAAGGTCACTCTCACAAACACTGACAATGGTTTGAGGATCAAGACTTGGCCTAGTGCTCCTGGAACTTCTCCTATTTCTAATCTTTATTATGAAGACGTTACCATGATTAATGCCAGGAACCCTATTATCATTGACCAGGAGTATTGCCCTTGGAACCAGTGCAATAAACGGAATCCATCAAAAATAAGGATAAAAAATGTTTCATTCAAAAACATTAGGGGCACGTCATTAACGAGGGAAGGGATAAACCTCATATGCAACAGTGCTTTGCCATGTCAGCAGGTCACGCTACGTGATATTGATCTCAAATTCAACGAAGCTCCGATAGTTGCCTTAAGTCCTGAATTCTTGGAGGTTCTATGTTGCACATCGTTTCGATGTGAAATTAGGGTTTTTGTGGAAGAAGGAGAAGAAACAGAGCATGATTCTGAGAGCTATGGTTGTTCCGGGAATCAGAAGAAGCGGAAGGTTAACGAATTATGCTCTCGCGATGCTGAAGATTTCAGCAGTGGTTCTGGCTCTTGGTGCAGCGAAGGAGCTTATTGGAATGGTGGTGCTGAGGTTCAGTCCAATTCAAATTCCGTACAGCTGAACGGTAAAATGGCACCGCGTGACGGCGGCGGAGATGGGACTCGGCCGCCATTGTTGCGGTCTACACGGGGCCGCCATCAGTCCTTGCCGTCGAGGTTCAATGACTCGGTTCTTGATTCATGGAAGAACCAAGGAGTCAAAGTGGAGGACACGGATTCCAGCTTTGAGGATGATGCAGATGAAGAGAAGAAAAAGAAGGGTGGTGTGGAGCAGAAGGTTAAAACTACTGGGAATGGTGGTGAAAGGAGGAAACAGGTTTACAGGCCGGAGGATTTCGCGTTGGGTGATATAGTTTTGGCGAAGTGTGGGAAAAGGTACCCTGCTTGGCCTGCTGTGGTGATTGATCCTATCTTGCAGGCTCCGAAATCCGTCCTCAGCTGCTGCGTTCTTGGTGCACTCTGCGTCATGTTCTTTGGCTTTTCGAAAAATGGGACCCAAAGGGACTATGCTTGGGTAAAGCAGGGAATGATATTCCCCTTCTCTAAGTTCATGGAAAGATTCCAGGGTCAGACACAGTTGTACAAGAGCAAACCGAGTGACTTTTGCATGGCATTGGAGGAGGCAATGCTGGCTGTAGATGGTCTTCTCAACTCACAGCTGGAAGTAGAGGAAGTAACTTATGTAAATGCTTATCCGTATGGATATTTAGAGCCCCCAGCCATGCCTGTTGATGATGAATACCACTGCGAGGATCAAGATACAATATCTTGTGCTGGCTGTTATTTGATGTTGCCATGCAAAACGATGAAGAAGATTAAGGACCCAAGTGGTGCATCTCAATTTTATTGCAAACATTGCTTTAAGTTACGAAAATCAAAACAATATTGTGGCATTTGCAAAAAGATTTGGCACCATTCACATGGTGGGAATTGGGTGTGCTGTGATCGCTGTAATGTTTGGGTGCATGCTGAGTGCGATAAAATATCCATTGAACTTTTCAAGGATCTTGAAAACACAGATTACTATTGCCCAGCGTGCAAGGGAAATTTCAATAAGAAAGTACCCATACCCAAAACAAGCAAGTCAAAAAAGAAGTATAATGTGGAAGACAGATTGGTAGAGAATAGCCAAAAATCTATAGTACCTGAGACGGTAACAGTGGTGTGCAATGACATGGAAGGACTCTACTTCCCAAAGCTTCATTTAATTATGTGCAAGTGTAGCTCTTGTGGTTCAAGGAAGCATACACCAAGTGAATGGGAAAGGCACACAGGTAGCAGAGCCAAAAAATGGAAACATAGTGTGAAAGTGAAAAACATGATGCTCCCACTAGAAAAATGGATCACAGAAAACATTTCACAAGATGGAGTTCCACAACAGTTAGATCAGCAGCAGGTGCTTAGCTTTTTGCAAGAAAATTATGAGCCAGTTCATGCAAAATGGACAACAGAAAGATGTGCAGTTTGCAGATGGGTAGAAGATTGGGAAGATAAAAAAATTATTATTTGTAACAGGTGCCAAATAGCAGTCCACCAAGAATGCTATGGGGCAAAGAATGTTCAAGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACACCAGATGTGGAGAGAGACTGTTGCCTCTGTCCTGTAAAAGGTGGTGCTCTAAAACCAACTGATGTTGAGATGCTATGGGTTCATGTGACATGTGCTTGGTTTCAACCTCAAGTGGTTTTCCAAAATCATGAGGCCATGGAACCTGCGGTAGGAATACTGAGAATTCTTCCTAATACCTTTGTTAAGGGTCCCAAATCCAGAATCTGTATTGGTTGTACATACTCCCCTGGGGTTTTCTCTCCCAGAGCCTCTCTTGAAAATCATAGAAGATGCTTCCGGGGGTCAAGGCTGGTTTCATCAAAGAATGTAGAGCTTATTCAATCTTCAAACTCTGAAGGTGACAAGATTGAGCCATTTTCTGCTGCAAGATGTCATGTATACTGTAGATCACTGAATAAGAAGGCTGAAATACCAATAATTCACTTGCTGAAGGGACCCGGCCATCATTCTTTAAGTGCAATAACTCAGTTGAACAGCTATAAGGATTCTGAAGATTCTAAAGTATTTACTTCTTTCAAGGAACGACTTCATCATTTACAGAAAATGGAAAAGCTTCGAGTTTGCTTTGGAAAATCGGGTATCCATGGATGGGGTCTTTTTGCTCGTAGAGATATACAAGAAGGAGAGATGGTTGTTGAGTATCGCATTGAGCGGGTAAGGCGAAGTGTTGCTGATTTAAGGGAAGTGAAATACCGTGCAGAAGGAAAAGATTGCTATCTGTTCAAGATCAGTGAGGATGTGGTAATTGATGCAACGTACAAGGGCAATATAGCACGGCTAATAAACCATTCTTGCATGCCAAATTGTTATGCAAGGATTATGAGTTTGGGTGATCAAGAGAGTCGGATCGTTCTCATTGCCAAGACGAATGTTTCTGCTGGCGAAGAATTAACGTATGATTACTTATTCGATCCAGATGAGCAGGATGAACTGAAAGTTCCCTGCCTTTGCAAAGCCTCCAATTGTAGGAAATTTATGAACTAG 3696 0.4313 MRAVYLKGPCKAPIELYVDGTVIAPMNPRGVGDEWQWVKVQYVDYFTLSGNGVFDGQGAIAWQQNDCGTNLNCARTPMNFGFNFMKHAVVRTITSKDSKNFNVNVLGCQNFTFDGFKVIAPGNSLNTDGIHLGRSNGVRSLNTDIAAGDDCISISDESVNTYIYNVKCGPGHGISVGSLGKYTTEAPVDGLILKKVTLTNTDNGLRIKTWPSAPGTSPISNLYYEDVTMINARNPIIIDQEYCPWNQCNKRNPSKIRIKNVSFKNIRGTSLTREGINLICNSALPCQQVTLRDIDLKFNEAPIVALSPEFLEVLCCTSFRCEIRVFVEEGEETEHDSESYGCSGNQKKRKVNELCSRDAEDFSSGSGSWCSEGAYWNGGAEVQSNSNSVQLNGKMAPRDGGGDGTRPPLLRSTRGRHQSLPSRFNDSVLDSWKNQGVKVEDTDSSFEDDADEEKKKKGGVEQKVKTTGNGGERRKQVYRPEDFALGDIVLAKCGKRYPAWPAVVIDPILQAPKSVLSCCVLGALCVMFFGFSKNGTQRDYAWVKQGMIFPFSKFMERFQGQTQLYKSKPSDFCMALEEAMLAVDGLLNSQLEVEEVTYVNAYPYGYLEPPAMPVDDEYHCEDQDTISCAGCYLMLPCKTMKKIKDPSGASQFYCKHCFKLRKSKQYCGICKKIWHHSHGGNWVCCDRCNVWVHAECDKISIELFKDLENTDYYCPACKGNFNKKVPIPKTSKSKKKYNVEDRLVENSQKSIVPETVTVVCNDMEGLYFPKLHLIMCKCSSCGSRKHTPSEWERHTGSRAKKWKHSVKVKNMMLPLEKWITENISQDGVPQQLDQQQVLSFLQENYEPVHAKWTTERCAVCRWVEDWEDKKIIICNRCQIAVHQECYGAKNVQDFTSWVCRVCETPDVERDCCLCPVKGGALKPTDVEMLWVHVTCAWFQPQVVFQNHEAMEPAVGILRILPNTFVKGPKSRICIGCTYSPGVFSPRASLENHRRCFRGSRLVSSKNVELIQSSNSEGDKIEPFSAARCHVYCRSLNKKAEIPIIHLLKGPGHHSLSAITQLNSYKDSEDSKVFTSFKERLHHLQKMEKLRVCFGKSGIHGWGLFARRDIQEGEMVVEYRIERVRRSVADLREVKYRAEGKDCYLFKISEDVVIDATYKGNIARLINHSCMPNCYARIMSLGDQESRIVLIAKTNVSAGEELTYDYLFDPDEQDELKVPCLCKASNCRKFMN 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03083 1231 MobiDBLite consensus disorder prediction 439 473 - -
Adu03g03083 1231 Gene3D - 2 303 IPR012334 -
Adu03g03083 1231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 845 907 IPR013083 -
Adu03g03083 1231 Pfam PHD-finger 870 903 - -
Adu03g03083 1231 PANTHER PHD FINGER PROTEINS 320 967 - -
Adu03g03083 1231 Pfam PHD-zinc-finger like domain 910 978 - -
Adu03g03083 1231 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 979 1231 - -
Adu03g03083 1231 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 320 967 - -
Adu03g03083 1231 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 321 1231 IPR025780 -
Adu03g03083 1231 Gene3D SET domain 1011 1231 IPR046341 -
Adu03g03083 1231 SUPERFAMILY FYVE/PHD zinc finger 854 919 IPR011011 -
Adu03g03083 1231 PANTHER PHD FINGER PROTEINS 979 1231 - -
Adu03g03083 1231 SUPERFAMILY Pectin lyase-like 4 300 IPR011050 -
Adu03g03083 1231 ProSiteProfiles Extended PHD (ePHD) domain profile. 908 1030 IPR034732 -
Adu03g03083 1231 SMART PHD_3 666 718 IPR001965 -
Adu03g03083 1231 SMART PHD_3 856 903 IPR001965 -
Adu03g03083 1231 Pfam PWWP domain 486 582 IPR000313 -
Adu03g03083 1231 ProSiteProfiles SET domain profile. 1089 1206 IPR001214 GO:0005515
Adu03g03083 1231 SMART pbh1 158 178 IPR006626 -
Adu03g03083 1231 SMART pbh1 219 240 IPR006626 -
Adu03g03083 1231 SMART pbh1 43 64 IPR006626 -
Adu03g03083 1231 SMART pbh1 188 209 IPR006626 -
Adu03g03083 1231 SMART pbh1 108 134 IPR006626 -
Adu03g03083 1231 SMART pbh1 253 280 IPR006626 -
Adu03g03083 1231 SUPERFAMILY SAND domain-like 754 814 IPR010919 -
Adu03g03083 1231 Gene3D - 473 592 - -
Adu03g03083 1231 ProSiteProfiles Zinc finger PHD-type profile. 854 905 IPR019787 -
Adu03g03083 1231 SUPERFAMILY Tudor/PWWP/MBT 477 590 - -
Adu03g03083 1231 ProSiteProfiles Zinc finger PHD-type profile. 664 720 IPR019787 -
Adu03g03083 1231 ProSiteProfiles PWWP domain profile. 497 554 IPR000313 -
Adu03g03083 1231 SMART PostSET_3 1215 1231 IPR003616 -
Adu03g03083 1231 SMART set_7 1089 1212 IPR001214 GO:0005515
Adu03g03083 1231 MobiDBLite consensus disorder prediction 390 424 - -
Adu03g03083 1231 Pfam Glycosyl hydrolases family 28 5 298 IPR000743 GO:0004650|GO:0005975
Adu03g03083 1231 Pfam SAND domain 754 821 IPR000770 GO:0003677
Adu03g03083 1231 ProSitePatterns Zinc finger PHD-type signature. 857 902 IPR019786 -
Adu03g03083 1231 SUPERFAMILY SET domain 1076 1231 IPR046341 -
Adu03g03083 1231 CDD PHD_ATX3_4_5_like 856 902 IPR042011 -
Adu03g03083 1231 Pfam PHD-finger 666 718 IPR019787 -
Adu03g03083 1231 CDD SET_SETD1-like 1078 1227 - -
Adu03g03083 1231 ProSitePatterns Polygalacturonase active site. 165 178 IPR000743 GO:0004650|GO:0005975
Adu03g03083 1231 Gene3D - 748 833 IPR010919 -
Adu03g03083 1231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 658 724 IPR013083 -
Adu03g03083 1231 Pfam SET domain 1100 1205 IPR001214 GO:0005515
Adu03g03083 1231 SMART PWWP_4 483 552 IPR000313 -
Adu03g03083 1231 CDD PHD_TCF19_like 667 717 - -
Adu03g03083 1231 ProSiteProfiles Post-SET domain profile. 1215 1231 IPR003616 -
Adu03g03083 1231 SUPERFAMILY FYVE/PHD zinc finger 664 726 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03083 Adu-Chr3 115222654 115240041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03083 4 301 Glycoside Hydrolase AT3G07840 49.664 3.20e-99 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Adu03g03083 Glyco_hydro_28 4.5e-80 CL0268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03083 - - gmx:100793624 1259.97