Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03075 ATGGATGATGCCGGTGGCGCCGTCGATGAAGTTGCGCGAGCACTCGATGTTGCTGATGCTCTCGGGAAGGCCGATAAATTGGACGATATTGCCCTCGGTTTGAAGGAGCTTGACATGGAACATTACGATGATGAAGATAAAGGAGTTGAGGTATTTAGTTCCGGGATTGGTGATCTTTATTATCCAAGTAACGACCTGGATCCTTATATCAAAGATAAGAACGATGATGATGACTCCGAGGAACTCGAAGACATGATCATTAATCCAACTGATTCTGTCATTGTTTGTGCTCGTACTGAGGACGATCTCAGTCTTCTCGAGGTTCATATACTTGAGGACGTCGGTACTAGTGAGATGAACATGTATGTCCATCATGATATCATAATTCCTGCATTTCCACTATCCACAGCTTGGCTTGACTGCCTTCAAGGAAGAGAGAAAGGAAACTTCTTAGCTGTTGGTTCAATGGAACCGTCAATAGAAATTTGGGACCTTGATGTTATTGATGCAGTGCAGCCATGCATGGTTTTAGGTGGCATTTCAGAAAAAAAGAAGAAGGGAAAGAAGAAATCAATCAAATACAAAGATGACAGTCACACTGACTCTGTACTTGGTCTTGCCTGGAACAAAGCGTTCAGGAATATACTTGCTAGTGCCAGTGCTGACAAGCGAGTCAAGATTTGGGATGTGGCTACTGGAAAGTGTGAGAGTACAATGGAGCATCACTCAGACAAGGTTCAAGCAGTTGCTTGGAATCATCGTGAACCAGAAATTCTTCTTAGTGGTTCATTTGATCATACTGTGGTCCTGAGGGATGGAAGAATGCCATCCCATCCTGGTTATAAGTGGTCAGTCACAGCTGATGTCGAGAGCTTGGCCTGGGATCCACACACTGAGCACTATTTTGTGGTGAGTCTCGAGAATGGTACTGTCAAGTGTTTTGATGTTCGGACCGCAAAGTCTGAATCCACATCTGATCTAAGTTCTACATTTACTCTTCATGCACATGACAAAGCTGTTACCTCAGTATCCTATAACGTCTCAGCACCTAATCTACTTGCTACTGGATTGATGGACAAAACGGTAAAGCTTTGGGATTTATCGAATAACCAACCATCTGTTGTGGCATCTAAAAACTCCAATGCTGGAGCTGTATTTTCTATTTCGTTCTCAGAGGACAACCCCTTTGTGTTGGCTATAGGAGGCTCAGAGGGAAAATTGCAAGTTTGGGACACTTTATCTGAGTCTGCTGTCTCTCGGCGTTATGAAAATTACAACAAGAATAGAACTCGGTCGTGA 1299 0.4357 MDDAGGAVDEVARALDVADALGKADKLDDIALGLKELDMEHYDDEDKGVEVFSSGIGDLYYPSNDLDPYIKDKNDDDDSEELEDMIINPTDSVIVCARTEDDLSLLEVHILEDVGTSEMNMYVHHDIIIPAFPLSTAWLDCLQGREKGNFLAVGSMEPSIEIWDLDVIDAVQPCMVLGGISEKKKKGKKKSIKYKDDSHTDSVLGLAWNKAFRNILASASADKRVKIWDVATGKCESTMEHHSDKVQAVAWNHREPEILLSGSFDHTVVLRDGRMPSHPGYKWSVTADVESLAWDPHTEHYFVVSLENGTVKCFDVRTAKSESTSDLSSTFTLHAHDKAVTSVSYNVSAPNLLATGLMDKTVKLWDLSNNQPSVVASKNSNAGAVFSISFSEDNPFVLAIGGSEGKLQVWDTLSESAVSRRYENYNKNRTRS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03075 432 Gene3D - 36 274 IPR015943 GO:0005515
Adu03g03075 432 PANTHER PERIODIC TRYPTOPHAN PROTEIN 1 24 424 IPR044285 GO:0006364
Adu03g03075 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 378 420 IPR001680 GO:0005515
Adu03g03075 432 Coils Coil 422 432 - -
Adu03g03075 432 ProSitePatterns Trp-Asp (WD) repeats signature. 353 367 IPR019775 -
Adu03g03075 432 Pfam WD domain, G-beta repeat 330 366 IPR001680 GO:0005515
Adu03g03075 432 PRINTS G protein beta WD-40 repeat signature 216 230 IPR020472 -
Adu03g03075 432 PRINTS G protein beta WD-40 repeat signature 353 367 IPR020472 -
Adu03g03075 432 PRINTS G protein beta WD-40 repeat signature 398 412 IPR020472 -
Adu03g03075 432 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 24 424 - -
Adu03g03075 432 ProSitePatterns Trp-Asp (WD) repeats signature. 216 230 IPR019775 -
Adu03g03075 432 Pfam Anaphase-promoting complex subunit 4 WD40 domain 195 253 IPR024977 -
Adu03g03075 432 Gene3D - 275 428 IPR015943 GO:0005515
Adu03g03075 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 333 375 IPR001680 GO:0005515
Adu03g03075 432 SUPERFAMILY WD40 repeat-like 147 417 IPR036322 GO:0005515
Adu03g03075 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 196 238 IPR001680 GO:0005515
Adu03g03075 432 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 333 371 - -
Adu03g03075 432 SMART WD40_4 232 272 IPR001680 GO:0005515
Adu03g03075 432 SMART WD40_4 187 229 IPR001680 GO:0005515
Adu03g03075 432 SMART WD40_4 276 315 IPR001680 GO:0005515
Adu03g03075 432 SMART WD40_4 371 411 IPR001680 GO:0005515
Adu03g03075 432 SMART WD40_4 125 164 IPR001680 GO:0005515
Adu03g03075 432 SMART WD40_4 326 366 IPR001680 GO:0005515
Adu03g03075 432 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 196 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03075 Adu-Chr3 115120852 115125622 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03075 213 411 U-box Gene Family AT2G33340 30.288 1.00e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03075 K14791 - gmx:100807947 650.203