Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03074 ATGCTTTTCATGATGCAGGTATATATATCTTGGGTATTCGACAGTGAAGTAGAAGCTGCAAGAGCTTATGACAAGGCTGCCATCAAATGCAATGGAAGGGAAGCAGTGACTAACTTTGAGCCAAGTACATATGAAGGAGAGATGAAATCTCCAGCCATCAATGAAGGTGATTCACCATTTTTCGGTGAGATGTGGTCAAGGTCGATAAGTACGGAACTCTGTGCTGTTCTCAATGCTTCTAGTTCTGCTGAAACTTCTTTTATGGTTGGTCTTTTCTTCCCACTGAGTCTCAAGCATCTCATTGCAAGATTTGCAATGGCAAGAATGTGA 330 0.4182 MLFMMQVYISWVFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMKSPAINEGDSPFFGEMWSRSISTELCAVLNASSSAETSFMVGLFFPLSLKHLIARFAMARM 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03074 109 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 50 - -
Adu03g03074 109 SUPERFAMILY DNA-binding domain 12 41 IPR016177 GO:0003677
Adu03g03074 109 Gene3D AP2/ERF domain 6 41 IPR036955 GO:0003700|GO:0006355
Adu03g03074 109 SMART rav1_2 10 46 IPR001471 GO:0003700|GO:0006355
Adu03g03074 109 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 12 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03074 Adu-Chr3 115118461 115119917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03074 7 59 AP2-EREBP Transcription Factor Family AT4G36920 58.491 1.43e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03074 K09284 - gmx:100812898 89.7373