Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03054 ATGTCCACAACCAAATCTAAACCCATATTCTTGTTCTTCAAAACCCCAACTTGTGCCATGGCCTCCCTCATTTCCCTTCTCTCCCTCTCCCTCCTACTCTTCTTCACCCTCTCCTCCGCCACGCGCCACCACCACAACAACAACAACAACCACAATTCCCACACTCCCTCCACCCCCACACCCACCCCCATTGCCGCCGTCTCACCCGCAATCCAACAAGCCTGCAAGGGCACGCGATTTCCCCAGCAATGCGAGTCCACTCTCTCCCAATCCACCACTCTCCCGCCCAACCCAACCTCACTCCAGCTCCTCCAATCTGCCATCTCCGCCTCCTCCAACAACCTTAAAACCGCCCAGTCCATGGTCAAGTCCATCCTCGACACCTCTTCCGACAGCCGCAACCGCACCGTCGCCGCCACCACATGCCTCGAGGAACTCGCCAACTCCGACCACCGCCTATCCCAAGCCAACGATGCCCTGACACGTGACAAGACCAAGGACGCCCGCGCCTGGCTTACCGCCGCCCTTGTCTACCAGTACGACTGCTGGAATGGCCTCAAGTACGCCAACGACACATCCAAGGTCGGCGAAACGATGTCGTTTATCGACAACCTCACCCAACTCTCAAGCAACGCGCTCTCCATGGCCTTCTCCTACGACGCCTACGGGAAAGACCCGGCGACGTGGAAGCCTCCGGCGACAGAGCGCGACGGGTTCTGGGAAGCGACAGGATCTTCGGGCGGAGGTTCCGTACCAGGGTTCCCGACGGGCCTGAAGCCGGACGCTACGGTGTGCAAGGATGGCAGCAATGGGTGTTACAAGACGGTACAGGAAGCGGTTAACGCGGCGCCGAGTAACGGTAACGGCGGAAAGAGGTTCGTGATATACATTAAGGAAGGGGTATATGAAGAGACCGTCAGAGTTCCGTTAGAGAAGACGAATTTGGTGTTCTTGGGCGACGGCATGGGGAAAACGGTAATTACTGGCTCTGCTAACGCTGGCCAGCCCGGCATGACCACTTACAACTCTGCTACAGTCGCGGTTCTTGGGGATGGGTTCATGGCGAAGGATCTCACAATACAGAACACTGCTGGGCCTGATGCTCACCAAGCAGTGGCCTTCAGACTAGACAGCGATCTCTCAATCATTGAGAACTGTGAATTCATAGGCAACCAAGACACTCTCTATGCTCATTCCCTGCGCCAGTTCTACAAATCGTGCCGGATTATCGGGAACGTAGATTTCATCTTCGGCAACTCGGCCGCCATCTTCCAAGACAGCCAAGTCTTGGTGGCTCCAAGGCAAGTGAAGCCAGAGAAGGGGGAGAACAACGCTGTGACGGCGCACGGCAGGACAGATCCTGCACAGTCAACCGGGTTTGTGTTCCAGAACTGCCTGATCAATGGCACCGAGGAATACATGAAGTTGTATAATAGCAATCCCAAAGTGCATAAGAACTACTTGGGTAGGCCTTGGAAAGAGTACTCTAGAACAGTTTTCCTGAATTGCTTCTTGGAAGCATTGATCACACCCCAGGGTTGGATGCCATGGACTGGTGACTTTGCTCTCAAGACACTCTACTATGGAGAATTTGAGAATAAGGGACCTGGTTCTGATTTGTCTCAGAGGGTATCCTGGAGTAGCAAGGTCCCCTCGGAGCATGTTTTTGCTTATTCAGTGCAGAATTTCATCCAAGGAGATGAGTATATTCAATAA 1716 0.5425 MSTTKSKPIFLFFKTPTCAMASLISLLSLSLLLFFTLSSATRHHHNNNNNHNSHTPSTPTPTPIAAVSPAIQQACKGTRFPQQCESTLSQSTTLPPNPTSLQLLQSAISASSNNLKTAQSMVKSILDTSSDSRNRTVAATTCLEELANSDHRLSQANDALTRDKTKDARAWLTAALVYQYDCWNGLKYANDTSKVGETMSFIDNLTQLSSNALSMAFSYDAYGKDPATWKPPATERDGFWEATGSSGGGSVPGFPTGLKPDATVCKDGSNGCYKTVQEAVNAAPSNGNGGKRFVIYIKEGVYEETVRVPLEKTNLVFLGDGMGKTVITGSANAGQPGMTTYNSATVAVLGDGFMAKDLTIQNTAGPDAHQAVAFRLDSDLSIIENCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSAAIFQDSQVLVAPRQVKPEKGENNAVTAHGRTDPAQSTGFVFQNCLINGTEEYMKLYNSNPKVHKNYLGRPWKEYSRTVFLNCFLEALITPQGWMPWTGDFALKTLYYGEFENKGPGSDLSQRVSWSSKVPSEHVFAYSVQNFIQGDEYIQ 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03054 571 CDD PMEI-like_3 74 215 - -
Adu03g03054 571 TIGRFAM PME_inhib: pectinesterase inhibitor domain 64 214 IPR006501 GO:0004857
Adu03g03054 571 MobiDBLite consensus disorder prediction 45 64 - -
Adu03g03054 571 Gene3D - 258 571 IPR012334 -
Adu03g03054 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 215 IPR035513 -
Adu03g03054 571 Pfam Pectinesterase 261 567 IPR000070 GO:0030599|GO:0042545
Adu03g03054 571 Pfam Plant invertase/pectin methylesterase inhibitor 70 215 IPR006501 GO:0004857
Adu03g03054 571 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 43 570 - -
Adu03g03054 571 SUPERFAMILY Pectin lyase-like 257 570 IPR011050 -
Adu03g03054 571 PANTHER PECTINESTERASE 43 570 - -
Adu03g03054 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 218 IPR035513 -
Adu03g03054 571 SMART PMEI_2 66 215 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03054 Adu-Chr3 114536919 114539903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03054 63 569 Carbohydrate Esterase AT5G09760 68.945 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03054 - - adu:107480269 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03054 03 114536919 114539903 Adu03g03054 03 114536919 114539903 ECH
Adu03g03054 03 114536919 114539903 Adu10g01761 10 81158938 81161649 PCT