Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03038 ATGGATGCAAAGCTCCATCCAAACTCTGAGGAGTCCGGTAGTTCCTTCGACAACTTGAATTCGGTGTGGTTGTCTTCCGGTACAGCCAGTGGAGAAAACCAGCCAACATGTGACAGGGTCACAGCAGCTTATCTTCATCATATGCAGAACGGGAAGTTCGTCCAGCCCTTTGGGTGCTTGCTAGCTTTGGATGAGAAGACATTTAGGGTCATTGCATACAGTCAGAATGCATCTGAAATGCTTACCATGGTTAGCCATGCTGTCCCAGGTGTTGGTGATCACCCTGCTCTTGGCATTGGCACCGACATTCGGACTATTTTCACGGCCTCGAGTGCTGTTGCTTTGCAAAAGGCCCTTGCAGTTCTGAAGGGTGATGGCTTTAAATTTCATGAGGATGATCATAGGGAAGTGATTGCTGAGGTTGCAAAGCCAGGCCTTGAGCCATATCTGGGTTTGCACTATCCAACCACTGATATTCTCCAAGAGCTGCTCATAGTTTCCACTTGCCACTTGCAATATATGAATTCAATTGCTTCCCTAGTTATGGCAGTTGTGGTCAATGATCATGAAGATGGGGAAGATGGGAATGGATCTGATGTTGTTCAGCCACAAAAGAGAAAGAGAATTTGGGGTTTAGTAGTTTGCCATAACACTACTCCAAGAGACAAGGTATGGAGATTAGGTGTGGCTCCAAGTGAATCTCACATAAGAGAGTTAGCTTTATGGCCCTCTAAGTGCCATAAGGACTCCACAGGTTTGAGTACAGATAGCTTGTCTAATGCAGGCTTCCCAGGAGCTGCTGCTCTTGGTGACGTTGTTTGTGGGATGGCAACTGTGAGAATTTCTTCCATGGACGTAGTTTTCTGGTTTAGATCACACACTGCTGCAGAAATCAGATGGGGTGGTGCAAAGCATGAACCTGGTGAAAGGGATGATCCTACAAAGATGAGTCCAAGATCATCATACAAGGCTTTCCTTGAAGTTGTGAAGGGAAGGAGCTTACCATGGAAGGACTATGAATAA 1023 0.4614 MDAKLHPNSEESGSSFDNLNSVWLSSGTASGENQPTCDRVTAAYLHHMQNGKFVQPFGCLLALDEKTFRVIAYSQNASEMLTMVSHAVPGVGDHPALGIGTDIRTIFTASSAVALQKALAVLKGDGFKFHEDDHREVIAEVAKPGLEPYLGLHYPTTDILQELLIVSTCHLQYMNSIASLVMAVVVNDHEDGEDGNGSDVVQPQKRKRIWGLVVCHNTTPRDKVWRLGVAPSESHIRELALWPSKCHKDSTGLSTDSLSNAGFPGAAALGDVVCGMATVRISSMDVVFWFRSHTAAEIRWGGAKHEPGERDDPTKMSPRSSYKAFLEVVKGRSLPWKDYE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03038 340 PANTHER TWO-COMPONENT HISTIDINE KINASE 167 221 - -
Adu03g03038 340 PANTHER TWO-COMPONENT HISTIDINE KINASE 221 340 - -
Adu03g03038 340 PANTHER PHYTOCHROME A 167 221 - -
Adu03g03038 340 PANTHER PHYTOCHROME A 127 161 - -
Adu03g03038 340 PANTHER PHYTOCHROME A 1 121 - -
Adu03g03038 340 Pfam Phytochrome region 221 340 IPR013515 GO:0006355|GO:0009584
Adu03g03038 340 SUPERFAMILY GAF domain-like 127 221 - -
Adu03g03038 340 SUPERFAMILY PYP-like sensor domain (PAS domain) 49 127 IPR035965 -
Adu03g03038 340 PANTHER PHYTOCHROME A 221 340 - -
Adu03g03038 340 Gene3D PAS domain 49 168 - -
Adu03g03038 340 SUPERFAMILY GAF domain-like 221 340 - -
Adu03g03038 340 PANTHER TWO-COMPONENT HISTIDINE KINASE 127 161 - -
Adu03g03038 340 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 121 - -
Adu03g03038 340 Pfam PAS fold 43 121 IPR013654 GO:0006355
Adu03g03038 340 Gene3D - 210 340 IPR043150 -
Adu03g03038 340 ProSiteProfiles Phytochrome chromophore attachment site domain profile. 127 221 IPR016132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03038 Adu-Chr3 114023321 114024919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03038 209 340 Histidine Kinase Gene Family AT1G09570 65.672 3.79e-50 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03038 K12120 - var:108324398 201.445