Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03033 ATGCCGGCGTGGTGGAGTAGAAAATCCTGCAAGAACAAACAGCAGAATCAGGGTGAGGTTGAAGATGAGGAAGAGACACGTGGCAGGCAGAAATTCAATCTGATAGGATCGCCGATTAGCATTATCAGCAGCAGGAAGAAAGGCAAGGACAAGAACAAGAACAACAAGAGCTTCGATGAGCTTATCGCCTCTCGCAACTCACCGAGGACAAGCAAGGAATTCGCCAGCGTCGACGGTAACGACAATAACAGAGACCGAGACAGAGGGCTTCCGTTGCCTCGCCCTACGGTTTCGGCCAATCACAGCTTCAACAACGATCAGGGCCTCGTCTTTGGATCTACTTCGCTATCTGGTTCCAGCGTCAGCTCCTCAACCTCTTACGATGACCACCCTATATCTCCTCAATTCATTAACAACAGAGGACAAGGTGACATCAAATTCCATGTGAGGCCAAAGAGCCCAGGTGCCGGGTCAAGGGGGCCGACAAGCCCTACATCGCCACTTCATCAGAGGATTTTGAGTCTCGACTCTCCTACAGGCAAGCAAGACGATGGAAAAAGTGAATGTCACCCCTTGCCTCTTCCCCCTGGCTCTCCTACTAGTCCTTCCACCCTTTCCACCCCACGGGCAAATGGATCCTTAGAAAACAACGCCAGTAATCTGTCGAAGTGGAAGAAAGGAAAGCTTCTAGGAAGGGGAACTTTTGGGCATGTTTATCTTGGATTTAATAGTGAGAGTGGACAAATGTGTGCAATAAAGGAAGTCAGGGTTGTCTCTGATGATCCAACATCAAAAGAGTGCCTCAGACAACTTAATCAGGAGATAAACTTGCTTAATCAGCTTTCACATCCAAACATTGTTCAATACTATGGGAGTGAACTGGGTGAAGAAACACTATCAGTTTATTTGGAGTATGTTTCTGGTGGTTCTATCCATAAATTGCTACAGGAATATGGTTCATTTAAGGAGCCTGTCATTCAAAATTATACCAGGAAGATTGTATCTGGGCTTGCTTATTTGCATGCAAGAAATACAGTACACAGAGATATCAAAGGAGCTAACATACTTGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACTTATAAATTCTGCTGCCTCAGTACTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACCAATGGCTATGGTCTTCCAGTTGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACGTCGAAGCCTCCATGGAATCAATATGAAGGGGTAGCTGCCATATTTAAAATTGGTAACAGCAAAGATATGCCTGAAATCCCTGAACATCTTTCAGATGATGCCAAAAGCTTCATTAAGCTATGTTTAAATAGGGACCCGTTAGCACGCCCAACAGCTCAAATGCTACTAGACCACCCCTTCATTCGTGACCAATCAGCAACAAAAGCTGTAAATGTTAGCATAACCAGAGATGCTTTCCCCCGCATGTTAGATGGAAGCCGGACTCCGCCGCCTGTTTTGGAGCATCAATCCAATAGAACAAGTATAACGTCACTTGATGGAGATCATGCAACAAAGACAGCTCGAGCAGCTTCTCACGCATTAAGGAGCCCAAGAGACAACGCAAGAACAATCACATCTTTGCCAGTGTCTCCCTCTTCAAGTCCATTGAGACAATATGGGACAGNNNGTTTCTTTTCTCCTCCTCATCCAACTTACACAATGATGGGGCAAAATAATTTCAATTTGAGTGACACGTCGCCATATTCTGTGAGATCAAATGCAGCATTCACTCTCGATCCTTGGCATGAAACGTCTCGATACAAAGCCCAAACACCACTTGGTGGATCTCCAAGAATGAGATTCATTTGA 1887 0.4499 MPAWWSRKSCKNKQQNQGEVEDEEETRGRQKFNLIGSPISIISSRKKGKDKNKNNKSFDELIASRNSPRTSKEFASVDGNDNNRDRDRGLPLPRPTVSANHSFNNDQGLVFGSTSLSGSSVSSSTSYDDHPISPQFINNRGQGDIKFHVRPKSPGAGSRGPTSPTSPLHQRILSLDSPTGKQDDGKSECHPLPLPPGSPTSPSTLSTPRANGSLENNASNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVVSDDPTSKECLRQLNQEINLLNQLSHPNIVQYYGSELGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRKIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKLINSAASVLSFKGSPYWMAPEVVMNTNGYGLPVDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSDDAKSFIKLCLNRDPLARPTAQMLLDHPFIRDQSATKAVNVSITRDAFPRMLDGSRTPPPVLEHQSNRTSITSLDGDHATKTARAASHALRSPRDNARTITSLPVSPSSSPLRQYGTXXFFSPPHPTYTMMGQNNFNLSDTSPYSVRSNAAFTLDPWHETSRYKAQTPLGGSPRMRFI 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03033 628 MobiDBLite consensus disorder prediction 544 566 - -
Adu03g03033 628 Gene3D Transferase(Phosphotransferase) domain 1 221 502 - -
Adu03g03033 628 MobiDBLite consensus disorder prediction 59 77 - -
Adu03g03033 628 ProSiteProfiles Protein kinase domain profile. 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03033 628 MobiDBLite consensus disorder prediction 14 30 - -
Adu03g03033 628 MobiDBLite consensus disorder prediction 1 218 - -
Adu03g03033 628 MobiDBLite consensus disorder prediction 158 177 - -
Adu03g03033 628 PANTHER MAP KINASE KINASE KINASE 1 609 - -
Adu03g03033 628 ProSitePatterns Protein kinases ATP-binding region signature. 230 253 IPR017441 GO:0005524
Adu03g03033 628 MobiDBLite consensus disorder prediction 510 527 - -
Adu03g03033 628 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 609 - -
Adu03g03033 628 MobiDBLite consensus disorder prediction 203 218 - -
Adu03g03033 628 SMART serkin_6 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g03033 628 SUPERFAMILY Protein kinase-like (PK-like) 221 567 IPR011009 -
Adu03g03033 628 MobiDBLite consensus disorder prediction 44 58 - -
Adu03g03033 628 CDD STKc_MEKK1_plant 223 480 - -
Adu03g03033 628 MobiDBLite consensus disorder prediction 97 140 - -
Adu03g03033 628 MobiDBLite consensus disorder prediction 500 568 - -
Adu03g03033 628 Pfam Protein kinase domain 225 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03033 Adu-Chr3 113862160 113866640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03033 1 544 MAP Kinase Kinase Kinase AT1G53570 57.754 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Adu03g03033 Pkinase 6.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03033 K04421 - gmx:100787064 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03033 03 113862160 113866640 Adu03g03033 03 113862160 113866640 ECH
Adu03g03033 03 113862160 113866640 Adu10g01791 10 82530273 82535235 PCT