LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu03g03022	ATGGAAGATCCATTAAAGAAAAGGGAAGACATAGTGTGCTATGCACCACAGATGATAACAACAAACGGGATATGGCAAGGAGATAACCCATTGAATTATGCGTTGCCTCTCTTCATGTTGCAAGTTATGTTAGTTGTCATTGCCACCCGCATCTTTGTCTTCATCCTCAAGCCCATTCGCCAGCCTCGCGTTATTGCTGAAATCTTGGGAGGTGTAATATTGGGTCCTTCGGTGCTTGGACAAAGCAAAACATTTGCAGAGGCAGTTTTTCCTCTGAGAAGTGTTATGGTGATTGAAACAATGGCAAACCTTGGTCTGCTGTACTTCCTGTTCTTGGTTGGAGTGGGAATGGATGTTTCATCGCTGAAGCGCATTGGCAGAAAAGCAGTTTTCATAGCAGCTGGAGGGATGGTGTTGCCCTTTGTCATTGGAGCAATCTTCTCCTTTGTTATCACCAGTGGTGACAGGCCGGTTAACAAAGGTTTCATAACTGATGCTATGGGGACACATTCTGTTTTTGGAGCATTTGTTTTTGGATTGACAATCCCAACTGGACCACTTAGTTTAACTCTTGTGGAGAAAATTGAGGACTTCGTCTCAGGGCTTTTGCTTCCCTTATTCTTTGCAATTAGTGGGTTGAAGACTAATTTGGGTCTCATCAAAGGTGTATTCCCGTGGTTAACTATAGTCACCCTTGTTTTGCTATCTTGCATTGGCAAAATTGCTGGAACCATATTTGTTGCAGTTTCTTATCAAATGACACTTGATGAAGGAGCAGCTCTAGGCTTACTCATGAACTCAAAAGGCCTTGTTGAGATGATTGTGCTTAATGTTGGCAGGGACCAAAAGGTTTTGGATGAGAGATCATTTGCAATAATGGTCACCATAACTGTGCTAATGACTGGAATAATTGTACCTGGATTATCAGCTATCTACAACCCAACAAAGAGGGTCATATCATACAAAAGAAGAACAATTCAGATGTCAAGAAAAGATGAAGAGCTGAAGGTCCTAGTTTGTATCCATACACCTCGGAACGTGCCATCCATAATAAACCTTCTTGATGCCTCAAATCCAACAAAGAAGTCACCAATATGCATCTATGTGCTCCATTTGGTAGAACTCACGGGCCGTACATCTGCATTGCTCATTGTCCACAACTCTAGAAAATCGGATCAGCCTGCACTTAACGCAACTCAAGCTCAATCTGATCACATAATCAATGCCTTTGCCAACTACGAGCAACAGGCTTCTTGTGTCACTGTGCAGCCCTTGACAGCAATGTCCCCTTACTCCACAATGCATGAAGACGTATGCAATTTGGCCGAGGACAAGCGCGTCGCCTTAATAATCCTCCCATTCCACAAACTACATACAATTGATGGTGGAATGGAACCAATAAACGCGCCATTTCGCACTGTAAACCGCAATGTGCTTGCAAATGCGCCTTGCTCGGTTGGAATTTTAGTAGACAGAGGCTTGAATTGGTCGAACCGCTTGGTTGATGATGTTGTAGTGTCTCATTACGTGGCAGTGTTGTTCTTTGGAGGTCCAGATGACAGAGAAGGATTGAGCTACGGATGGAGGATGTCGGAACATGAAGGTGTATGCCTTACTCTAATGCGCTTCGTTCCTGGAACAGAAGTTGGAAGCACAACGGACACAAAGCAGCCTCCTAGCTACAACAACAATACAAACAATATCCAAGAGGAACCTAGGATACTAACGGTAGATACTGAGAAGGACACAGAAAAACAATTGGATGAGAGGCTTATACAATTGTTCAGGATGAACCGTGTGAACAATGAATCCATTGTGTACATTGAGAAAGTGGTGAACAATGGCGAAGAGACCGTAGCCGCTATAAGATCAATGGAGGACATCCATGATCTTATCATAGTTGGGAGAGGACAAGGAATGATATCGCCACTCACAGCAGGACTCACTGACTGGAGTGAGTGCCCCGAGTTAGGAGCTATTGGGGATTTGTTAGCATCACCAGATTTTGAAACATCTGCTTCAGTCTTGGTAGTTCAACAATATATTGGCCAAGGTTCAGAGGTAGATAATTCGTTGGTAACAACAGATAATGTAGTTAACACAAATGAAGAATATATTAATCAGAGAACACATCATTCAGTAGCACCAACAACTGGACATACCGTTCATATGTTCAATGACACAGAACGGCAACTGAGATGA	2202	0.4314	MEDPLKKREDIVCYAPQMITTNGIWQGDNPLNYALPLFMLQVMLVVIATRIFVFILKPIRQPRVIAEILGGVILGPSVLGQSKTFAEAVFPLRSVMVIETMANLGLLYFLFLVGVGMDVSSLKRIGRKAVFIAAGGMVLPFVIGAIFSFVITSGDRPVNKGFITDAMGTHSVFGAFVFGLTIPTGPLSLTLVEKIEDFVSGLLLPLFFAISGLKTNLGLIKGVFPWLTIVTLVLLSCIGKIAGTIFVAVSYQMTLDEGAALGLLMNSKGLVEMIVLNVGRDQKVLDERSFAIMVTITVLMTGIIVPGLSAIYNPTKRVISYKRRTIQMSRKDEELKVLVCIHTPRNVPSIINLLDASNPTKKSPICIYVLHLVELTGRTSALLIVHNSRKSDQPALNATQAQSDHIINAFANYEQQASCVTVQPLTAMSPYSTMHEDVCNLAEDKRVALIILPFHKLHTIDGGMEPINAPFRTVNRNVLANAPCSVGILVDRGLNWSNRLVDDVVVSHYVAVLFFGGPDDREGLSYGWRMSEHEGVCLTLMRFVPGTEVGSTTDTKQPPSYNNNTNNIQEEPRILTVDTEKDTEKQLDERLIQLFRMNRVNNESIVYIEKVVNNGEETVAAIRSMEDIHDLIIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASPDFETSASVLVVQQYIGQGSEVDNSLVTTDNVVNTNEEYINQRTHHSVAPTTGHTVHMFNDTERQLR	733

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu03g03022	733	Pfam	Sodium/hydrogen exchanger family	45	150	IPR006153	GO:0006812\|GO:0015299\|GO:0016021\|GO:0055085
	Adu03g03022	733	Pfam	Sodium/hydrogen exchanger family	162	307	IPR006153	GO:0006812\|GO:0015299\|GO:0016021\|GO:0055085
	Adu03g03022	733	PANTHER	CATION/H + ANTIPORTER	160	704	-	-
	Adu03g03022	733	PANTHER	CATION/H + ANTIPORTER	7	152	-	-
	Adu03g03022	733	PANTHER	CATION/H+ EXCHANGER 3	160	704	-	-
	Adu03g03022	733	Gene3D	-	37	159	IPR038770	-
	Adu03g03022	733	Gene3D	-	160	319	IPR038770	-
	Adu03g03022	733	PANTHER	CATION/H+ EXCHANGER 3	7	152	-	-

Showing 1 to 8 of 8 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu03g03022	Adu-Chr3	113607460	113610380	Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu03g03022	160	690	Antiporter Super Family	AT2G13620	65.160	0.0	717

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu03g03022	-		-	adu:107480185	1131.7

Showing 1 to 1 of 1 entries

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu03g03022	03	113607460	113610380	Adu03g03022	03	113607460	113610380	ECH

Showing 1 to 1 of 1 entries