Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03021 ATGATTAATGGATGGAAACATATGGCGAAGATAAACAGGAACACTTGTAAATCATTTTATTCCAAAAGAATTTCTCTACCATTCCATCCCAGCATCATACCGGACCTTGATCCCTCTCAACTTCATCCATGTCAATTAAATGGTAAGGCGTTTTCAAGTGGGAATCAACACTATTTCTTCACCAATAAAGTGAAGGAAAACAGAAGCACAGAAAATGGGTATTGGAAGGAAATAGGTTTGAGCGAACCTATAATCTCAGCTGATGCAAACAAGAAATTGGGAATCAAGAAGTATTTTGTCTTCACTCTTAATGAAGGCACAGAAACCAATTGGGTCATGCAGGAATACCATATTTCCTCATCTATGTTCCACAACCCTATTTCATGTTATGCAAATGGAACTGCTCACCGAAGATTATTAAGACCTGATCAAAATCAGAACAATAAATGGGTTTTGTGCAGAGTGTATGAGAAGAACAAGTCACAATCACAACAAGGTGCAACTGCAAACTCCTACTATAGCGACGAGGATGATTGTGGATCAGAACTTTCATATCTAGATGAGGTTTATCTGTCACTTGATGATGATCTTGAAGTCATAAGCCCCCCTAATTAA 615 0.3789 MINGWKHMAKINRNTCKSFYSKRISLPFHPSIIPDLDPSQLHPCQLNGKAFSSGNQHYFFTNKVKENRSTENGYWKEIGLSEPIISADANKKLGIKKYFVFTLNEGTETNWVMQEYHISSSMFHNPISCYANGTAHRRLLRPDQNQNNKWVLCRVYEKNKSQSQQGATANSYYSDEDDCGSELSYLDEVYLSLDDDLEVISPPN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03021 204 Pfam No apical meristem (NAM) protein 25 118 IPR003441 GO:0003677|GO:0006355
Adu03g03021 204 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 20 198 - -
Adu03g03021 204 ProSiteProfiles NAC domain profile. 1 158 IPR003441 GO:0003677|GO:0006355
Adu03g03021 204 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Adu03g03021 204 PANTHER NAC TRANSCRIPTION FACTOR 56 20 198 - -
Adu03g03021 204 SUPERFAMILY NAC domain 21 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03021 Adu-Chr3 113602717 113604799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03021 22 161 NAC Transcription Factor Family AT3G15510 32.237 4.62e-20 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu03g03021 NAM 1.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03021 - - gmx:100779578 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03021 03 113602717 113604799 Adu03g03021 03 113602717 113604799 ECH