Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02992 ATGAAGAGTGAATTGGAATTACCACCTGGATTCAGGTTCCACCCCACTGATGAGGAGCTTGTGAATCACTACTTGTGCAAGAAATGTGCTTCACAGTCAATTGCTGTTCCTATCATCAAGGAGATCGATTTGTACAAGTTTGATCCATGGCACCTTCCAGAGATGGCTCTATACGGCGAGAAAGAGTGGTATTTCTTCTCTCCCAGGGACCGCAAATATCCGAACGGATCACGCCCAAACCGGGCTGCGGGTACAGGGTACTGGAAGGCCACAGGTGCCGATAAGCCCATTGGAAAGCCCAAGGCCCTGGCCATCAAGAAGGCACTGGTGTTTTACGCTGGCAAAGCCCCCAAAGGAGTGAAAACCAATTGGATCATGCATGAATATAGACTCGCTAATGTTGACAGATCCGCAGGCAACAAGAAAAATAACTTAAGGGTATGTCGTGCTCTATGCACCTTAATTTCAATCTCACAACATTTTAAATTTGGTAAAAAATATAATGATTGGGAATTATTGCAGCTTGATGATTGGGTGCTATGCCGAATTTACAACAAGAAAGGAAAGATTGAGAAATACAACCATCTTGGGGCGGCGGATCACAAATCAGCATCTTCGTCGGAGGAGAATGAGAGGAAGCCGGAGGTGAAGGAGCGATTGCATATGGATACGTCGTCGGATTCGGTGGTATCGGCGGATGTGACGTGGGAGAGTAGGGAGGTGCAGAGCGAGCCAAAGTGGAATGACCTGCTTGACCAAGTCTTTGATTTCCAGTTAGGCAGTTTCGTTGATTTCTCATCGGCTGGAGATGACCCTTTTGCCCCCCAGCTCTCTCCTTGGCATCAGGACACGTTCATCACATTTTAA 867 0.4717 MKSELELPPGFRFHPTDEELVNHYLCKKCASQSIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALAIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAGNKKNNLRVCRALCTLISISQHFKFGKKYNDWELLQLDDWVLCRIYNKKGKIEKYNHLGAADHKSASSSEENERKPEVKERLHMDTSSDSVVSADVTWESREVQSEPKWNDLLDQVFDFQLGSFVDFSSAGDDPFAPQLSPWHQDTFITF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02992 288 SUPERFAMILY NAC domain 4 151 IPR036093 GO:0003677|GO:0006355
Adu03g02992 288 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Adu03g02992 288 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102 167 259 - -
Adu03g02992 288 MobiDBLite consensus disorder prediction 201 224 - -
Adu03g02992 288 Gene3D NAC domain 16 191 IPR036093 GO:0003677|GO:0006355
Adu03g02992 288 ProSiteProfiles NAC domain profile. 7 186 IPR003441 GO:0003677|GO:0006355
Adu03g02992 288 PANTHER NAC TRANSCRIPTION FACTOR 56 1 148 - -
Adu03g02992 288 PANTHER NAC TRANSCRIPTION FACTOR 56 167 259 - -
Adu03g02992 288 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02992 Adu-Chr3 112813261 112814569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02992 1 288 NAC Transcription Factor Family AT5G08790 59.000 8.15e-110 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu03g02992 NAM 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02992 - - gmx:100170751 358.992