Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02979 ATGTCAAAGGGATTTGAGATTCATCAAGAGAATAATGAAGGAAATGGCGGCAAGAGTAGTAATGATAATGAGGGTGAGGAAAATTCATTTGACATAAATGAAGGAGTGGCTATGAGTGATGATGGGGAATTAGAAGAAGAGAATAATAATGAAGCAAAGGAGGAGGAGGATGATAACAATGAAGAAGGGAATTTAACAAACCCAAGTAGCAGCAGCACAGCATCAAGAGAAGGGAAGAGAGGGAGTGGTGTGAGGCAATATGTGAGATCAAAGATGCCAAGGCTTTGTTGGACTCCTAATCTTCATCTCTCCTTTGTCCATGTTATTCAGAGGCTTGGAGGTCAAGAAATTCTAGCTTTAGTTCTTGAGAAGTTGAAACCATATGGAGGCCTTCAAGAATCATTCGAATCTGCTAAGGCAATTTCAGTGGGTGCATCAAAAGGTGTTCAAAGGCTAGGAAATCAACTGCTAATGGTGTTACAAAACACGAAAATAAAGCTGCATCTTCGGTTGCGTGAAGGTGTGGGTATAGCACCATGCAATGCTGCTGAATATCGTGCAATGATATTAGGAATGAGATATGCTCTTAAAAAGGGATTTTCTTTTATCCGTATCCAGGGCGACTCCAAGCTTGTTTGCATGCAGTTCTCATGCATACAGGTTACTGTTGCCCAACAGCTTCTACACCTCTAA 693 0.4113 MSKGFEIHQENNEGNGGKSSNDNEGEENSFDINEGVAMSDDGELEEENNNEAKEEEDDNNEEGNLTNPSSSSTASREGKRGSGVRQYVRSKMPRLCWTPNLHLSFVHVIQRLGGQEILALVLEKLKPYGGLQESFESAKAISVGASKGVQRLGNQLLMVLQNTKIKLHLRLREGVGIAPCNAAEYRAMILGMRYALKKGFSFIRIQGDSKLVCMQFSCIQVTVAQQLLHL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02979 230 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 117 - -
Adu03g02979 230 Pfam Reverse transcriptase-like 182 219 IPR002156 GO:0003676|GO:0004523
Adu03g02979 230 Gene3D - 138 227 IPR036397 GO:0003676
Adu03g02979 230 MobiDBLite consensus disorder prediction 1 85 - -
Adu03g02979 230 MobiDBLite consensus disorder prediction 63 79 - -
Adu03g02979 230 MobiDBLite consensus disorder prediction 38 62 - -
Adu03g02979 230 SUPERFAMILY Ribonuclease H-like 145 215 IPR012337 -
Adu03g02979 230 MobiDBLite consensus disorder prediction 1 23 - -
Adu03g02979 230 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 117 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02979 Adu-Chr3 112561206 112563433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02979 84 125 G2-like Transcription Factor Family AT2G42660 63.636 6.07e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02979 - - ahf:112735089 224.172