Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02972 ATGGCCGGTGCAGGTGCTCCTTTGCCGGTAGCATACCAAGCATGGACGAGTCTAGCAGTACCGGACTGGCTAAACAAAGGGGACAACGCATGGCAGATGGTGTCAGCCACCCTGGTGGGGATACAGAGCATGCCCGGATTAGTCATCTTGTACGGAAGCATAGTCAAGAAGAAATGGGCCGTCAACTCCGCTTTCATGGCCCTCTACGCATTCGCCGCTGTTGTCATATGCTGGGTCACTTGGGCCTACAAGATGTCCTTTGGGGACAAGCTCCTGCCCTTCTGGGGCAAAGCTGGGCCTGCCTTGGGCCAGAAGTTCCTCATCAAGCAGGCCGCGCTCCCCGCAACGCCTCATTACTACAACACGGGGGCTCTGGAGACGGCGGAAATTGAGCCATATTATCCCATGGCCACCATGGTGTGGTTTCAGTGCGTTTTCGCAGCCATCGCTGTGGTCATACTGGCCGGCTCGGTGCTGGCTAGGATGAACTTCAAGGCGTGGATGATGTTCGTGCCGTTATGGTTGACTTTCTCGTACACCATAGGCGCGTTCAGCTTGTGGGGTGGTGGCTTCTTGTTCCAGTGGGGTGTTATGGACTACTCTGGTGGTTACGTCATCCATCTTTCCTCCGGCGTTGCAGGCTTCACTGCCGCTTATTGGGTTGGGCCAAGGTCGAAGAAGGACAGGGAGAGGTTCCCACCAAACAACGTGCTGCTAACGCTGACAGGGGCGGGGCTGCTGTGGCTGGGGTGGGCAGGGTTCAACGGAGGGGACCCGTACTCGGCCAACATAGACTCATCGATGGCGGTGCTGAACACGAACGTGTGCGCCGCCACCAGCCTCTTAGTGTGGACGTGGCTTGATGTCATATTCTTCAACAAGCCCTCCGTTATTGGAGCCGTTCAGGGCATGATTACTGGCCTCGTTTGCATCACTCCCGCCGCAGGTCTGGTTCAAGGATGGGCAGCCATAGTTATGGGAGTTCTATCAGGAAGTGTGCCATGGTACACCATGATGGTATTGGGCAAGAAGCTCACAATCTTCCAAATAGTCGACGACACTCTCGCCGTCTTCCACACCCACGCCGTCGCCGGACTCCTGGGCGGCATCCTCACGGGGTTTCTCGCGGAGCCACGGCTGAGTTCCCTGTTTCTTGCGGTGACCAACTCTAGAGGAGCGGTGTACGGAGGGTCGGCTGGGGGAGTTCAAATCCTGAAGCAATTGGTTGGAGGATTGTTCGTCATTGGATGGAATTTGGTAGCCACCTCCATAATTTGTGTGGTGGTGAAGTTGGTGGTTCCTTTGAGAATGACGGATGAAGAGTTGCTGATTGGTGATGATGCAGTTCACGGAGAAGAAGCTTATGCCTTATGGGGTGACGGAGAGAAACTTAGCCTCTACAAAGATGACACCACCCAGCATGGAATGGCAATGGCTTCCAGTGGTGCCACTCAAGTTGTCTAA 1464 0.5533 MAGAGAPLPVAYQAWTSLAVPDWLNKGDNAWQMVSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWVTWAYKMSFGDKLLPFWGKAGPALGQKFLIKQAALPATPHYYNTGALETAEIEPYYPMATMVWFQCVFAAIAVVILAGSVLARMNFKAWMMFVPLWLTFSYTIGAFSLWGGGFLFQWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSKKDRERFPPNNVLLTLTGAGLLWLGWAGFNGGDPYSANIDSSMAVLNTNVCAATSLLVWTWLDVIFFNKPSVIGAVQGMITGLVCITPAAGLVQGWAAIVMGVLSGSVPWYTMMVLGKKLTIFQIVDDTLAVFHTHAVAGLLGGILTGFLAEPRLSSLFLAVTNSRGAVYGGSAGGVQILKQLVGGLFVIGWNLVATSIICVVVKLVVPLRMTDEELLIGDDAVHGEEAYALWGDGEKLSLYKDDTTQHGMAMASSGATQVV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02972 487 Gene3D Ammonium transporter AmtB like domains 11 473 IPR029020 -
Adu03g02972 487 PANTHER AMMONIUM TRANSPORTER MEP2 16 469 IPR001905 GO:0008519|GO:0016020|GO:0072488
Adu03g02972 487 TIGRFAM amt: ammonium transporter 28 455 IPR001905 GO:0008519|GO:0016020|GO:0072488
Adu03g02972 487 PANTHER AMMONIUM TRANSPORTER 16 469 - -
Adu03g02972 487 SUPERFAMILY Ammonium transporter 23 437 - -
Adu03g02972 487 Pfam Ammonium Transporter Family 30 455 IPR024041 GO:0008519|GO:0016020|GO:0072488
Adu03g02972 487 PRINTS Rhesus blood group protein signature 143 159 IPR002229 GO:0005887
Adu03g02972 487 PRINTS Rhesus blood group protein signature 238 256 IPR002229 GO:0005887
Adu03g02972 487 PRINTS Rhesus blood group protein signature 269 291 IPR002229 GO:0005887
Adu03g02972 487 PRINTS Rhesus blood group protein signature 362 378 IPR002229 GO:0005887
Adu03g02972 487 ProSitePatterns Ammonium transporters signature. 199 224 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02972 Adu-Chr3 112153206 112155739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02972 136 474 Inorganic Solute Cotransporters AT2G38290 69.027 6.23e-164 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02972 K03320 - gmx:100785993 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02972 03 112153206 112155739 Adu03g02972 03 112153206 112155739 ECH