Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02899 ATGGCTGAACGCCGCAGAAGGAAGAAGCTCAATGACAGACTCTACATGCTCAGATCCGTTGTTCCTAATATCAGCAAAATGGACAGGGCTTCAATACTTGGGGATGCAATTGAATATATGAAAGAACTTCTGCAAAAGATTAATGACCTTCATAACGAATTGCAATCAATGCCTCCAACGGCACCTGCTTCAAGCTTGCATCATCCTTTGACACCAACTAATAATAATACTGCTACTCTACCGCCAGCAGCTGCTTCTCTTCCCAGCCGCATGATGATGAAGGAAACTGCTTCTTGCCCCACTTCTTCATTGCCAACTCCCAATGACCAGCCTGCCAGGGTTGAGGTTGGGTTGCGTGAAGGAAGAGGAGTAAATATCCATATGTTTTGTGATCAGAAGCCTGGTCTGTTGCTCTCAACACTCACCACTTTGGACAACCTTGGGTTAGATATCCAGCAGGCTGTTATCAGTTTCTTCAATGGCTTTGCTATGGACATTTTTCGAGCTGAGCAATGCAATGAAGGTCAGGATCTCCACCCAGATCAAATCAAAGCAGCACTCATTGAAGCATCTGAAGCATCCGGCTTCCATAACATCATTTAG 603 0.4511 MAERRRRKKLNDRLYMLRSVVPNISKMDRASILGDAIEYMKELLQKINDLHNELQSMPPTAPASSLHHPLTPTNNNTATLPPAAASLPSRMMMKETASCPTSSLPTPNDQPARVEVGLREGRGVNIHMFCDQKPGLLLSTLTTLDNLGLDIQQAVISFFNGFAMDIFRAEQCNEGQDLHPDQIKAALIEASEASGFHNII 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02899 200 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 194 - -
Adu03g02899 200 SMART finulus 1 49 IPR011598 GO:0046983
Adu03g02899 200 CDD bHLH_AtAMS_like 1 61 - -
Adu03g02899 200 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 67 IPR036638 GO:0046983
Adu03g02899 200 SUPERFAMILY ACT-like 123 191 IPR045865 -
Adu03g02899 200 MobiDBLite consensus disorder prediction 54 83 - -
Adu03g02899 200 PANTHER BHLH TRANSCRIPTIONAL FACTOR 1 194 - -
Adu03g02899 200 Gene3D - 1 58 IPR036638 GO:0046983
Adu03g02899 200 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 43 IPR011598 GO:0046983
Adu03g02899 200 Pfam Helix-loop-helix DNA-binding domain 2 43 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02899 Adu-Chr3 110105638 110108399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02899 1 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 69.767 4.86e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g02899 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02899 - - aip:107634598 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02899 03 110105638 110108399 Adu08g02764 08 44160657 44166521 PCT