Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02883 ATGGAAGCTTTTTCTACTTTTCCTTCTTCTTCTTACCATAATCACTACCCAATTCTTCTTGACTCGTCATCACTCTTCATCCCCAATAACACTACTACTACTACCCCTCCTCCAATAAAGCTTTATTCTTCTCTTCATCATGATCATCATATGATCAACACTACTGCTGATACTACTAGTCCCCATTATCCTCTTATTCCACCACCTAATCACCAACTCTTTCAACTTCATACATCTTCTTTGGATACTAGCTCTGTTGATCAAAGCTCCAAGGTTGTTGCTGCTACCACCAAAAGTTACAACAGTAGTGCTGATCCTTCTCCTCCTTTTCTCTCACATAACCACAGCCCTGAGTCCTCTGTGGTTGAAAACGGTGACCAAGTCACTCAGAACACTCCTCCTCCTATTAACATGGCGGACAACAAGCGGAAAACTACCTCTAACTCCTCTTCCTTCAACAACAATAAGGAGTTGTCAGCAGGTAGAGAAGGGAGAAGTAGCAAGAAACAAAGGAAGAGTAATAATGGTGGGAGTGGGGTGAAGAAGGGAGAGGAGAAGGAAAAAGAAGAGGCTCCAACAGCAACAGGGTATATCCACGTTAGAGCAAGAAGGGGCCAAGCAACTGATAGCCACAGCCTTGCTGAAAGGGTGAGAAGGGAGAAGATAAGTGAGAGGATGAAGATGTTGCAACGACTTGTGCCAGGCTGTGATAAGGTAACCGGAAAGGCCCTTGTGTTGGACGAGATCATCAATTATGTTCAGTCCCTACAAAATCAAGTAGAGTTCTTGTCAATGAAGCTTGCTTCAGTCAGCCCCTTCTTCTTTGACTTTGCAATGGACCTAGATAATGATAACAATAATGGCCACTTGGTTAGACCACTGGATCAGAACGTTCAGAATCAGAAGATAAGCAGCATAGGATCAACACCAGCACTGGCATCAGTACCACAATGCAGCACAAACCAGGTTACACCCTTTGCTGATACAACCACCATGACCACTACCACCGGTACCACCACCTTTCCCGGTGCTAATAATAATAACAGTGACTATCTTTTGGATTATTCATCAACATCACCAGTTTTCCTACAAGGACAGAGGTCATCAAATGTCTTCTCTGAGTATACCGGTGGTCAATTCTGGGAAGTAGAAGAAGACCAACGACAAAAGCAGCTTCTTCATCCATATGGACTTGGCAGCAACTTAGGTTCCTTGAATTAA 1221 0.4365 MEAFSTFPSSSYHNHYPILLDSSSLFIPNNTTTTTPPPIKLYSSLHHDHHMINTTADTTSPHYPLIPPPNHQLFQLHTSSLDTSSVDQSSKVVAATTKSYNSSADPSPPFLSHNHSPESSVVENGDQVTQNTPPPINMADNKRKTTSNSSSFNNNKELSAGREGRSSKKQRKSNNGGSGVKKGEEKEKEEAPTATGYIHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLASVSPFFFDFAMDLDNDNNNGHLVRPLDQNVQNQKISSIGSTPALASVPQCSTNQVTPFADTTTMTTTTGTTTFPGANNNNSDYLLDYSSTSPVFLQGQRSSNVFSEYTGGQFWEVEEDQRQKQLLHPYGLGSNLGSLN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02883 406 MobiDBLite consensus disorder prediction 178 194 - -
Adu03g02883 406 SMART finulus 212 262 IPR011598 GO:0046983
Adu03g02883 406 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 206 256 IPR011598 GO:0046983
Adu03g02883 406 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 204 271 IPR036638 GO:0046983
Adu03g02883 406 CDD bHLH_AtBPE_like 196 281 - -
Adu03g02883 406 MobiDBLite consensus disorder prediction 97 160 - -
Adu03g02883 406 Gene3D - 203 271 IPR036638 GO:0046983
Adu03g02883 406 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 51 406 - -
Adu03g02883 406 Pfam Helix-loop-helix DNA-binding domain 210 257 IPR011598 GO:0046983
Adu03g02883 406 MobiDBLite consensus disorder prediction 97 214 - -
Adu03g02883 406 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 51 406 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02883 Adu-Chr3 109673074 109675895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02883 126 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 60.510 8.99e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g02883 HLH 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02883 - - ahf:112732895 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02883 03 109673074 109675895 Adu03g02883 03 109673074 109675895 ECH