Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02879 ATGAAAGTAACAGAATCCGAAGCGGAGGCGGAGGGGGTGACTGTAAGGGAGTGCATTGAAGTGATGTCAAGCCTCCTGAGCGAAATCCCATCCATGGAGAGCTTCAAGGGAAAGTGGTCACTCATCGGAGCCACACTGACACACCTCCAAACCCACCTCTCCGACTCCGATTTCCCCGCCTCAAACCCACTATCCCTCGACCTCCTCCGCTCTCTCTCGCAAACGCTCCACCACGCTCTCTCCCTCGCCCAACACTGCCACTCCCCCAACCCCCCTCACGGCAAGCTCAAGACACAGAGCGACCTCCACTCCCTCCTCGACACCCTCAACCGCCACCTCCACGACTCCACCATCCTCTCCCGCACCCATATCGACAACGCCGCCGCCCTCTCCACCAACCCCCGCGACTCTCTCAGATCCCAATCCAGGAACCTCATCACCCGCCTCCAAATCGGCTCACCGGACTCTCGAAACTCCGCCATGGACTCCCTGCTTTCTCTTCTCCATCAGGACGACAAGAACGTCGTCATCGCCGTCGCGCAGGGCGTGGTCCCGGTACTCGTGCGCACACTCGATCACTCCACCTCCTCTGAGTCCAAGGAAAAAGCCGTTGCCGCCATCGCCAGAATCTCAACCGTCGACACCAGCAAGCCCGTCCTCGCTGCCGAGGGCTTGCTTCTCCTCAACCATCTCCTCCGGGTACTCGATTCCGGAAGCGGGTTCGCGAAGGAGAAAGCCTGCATAGCGCTTCAGGCGCTGAGTTACTCGAAGGAGAACGCCAGGGCCATAGGCTCACGCGGCGGAATCTCGTCGCTCTTGGAGATCTGCCAAGCTGGCACCCCCGGTTCTCAAGCCTCCGCCGCCGGCGTTCTCAGGAATTTATCGCGCTTCGCCGAGATCAAGGAGAATCTCGTAGAAGAAAACGCTGTTTTCGTCCTCTTGGGTCTCGCTTCTTCCGGAACTGCGTTGGCGCAAGAGAATGCCATCGCCTGCCTCTGTGGTTTAGTCTCTGAGGACCAAAGCTTGAAGCTTTCGGTGGTTAGGGAAGGTGCGCTGGAGAGCTTGAAGAATTTCTGGGAGTCGGGTCGGAGCCCCGATGTAGCAATTGAATTTCTGGGTCAGCTGGCTTCGTGTTCGCGCGTGGCGGACGTTGTTGTCTCCGATGGGTTTGTTGTGCCGCGTGTGGTGGCTGCATTGGGGTCCGGAGTTATGGCGGTTAGAGTTGCGGCAGGTAAAGCCGTATATGCTATGTGTTTGGAGAGCGCAAGAGCGAGGAAGGAGTTGGGTGAGTGCGGCGGCGTTAGCCCTCTGATAAAGATGCTGGTGGATGGGAAGAGCACGGAGGAGAAGGAGGCGGGTGCGAAAGCATTGTCGGTGATGCTGATGCATGCAGGGAATCGGAGAGTGTTTCGGAAGGACGAGAGAGGGATAGTGAGTGCGGTTCAGTTGTTGAACCCTTCGGTGGTGGGTTTGGATAAGAGGTACCCGGTGTCGTTGCTGGAGTCGCTGGTTCATTCCAAGAAGTGTAAGAAGCAGATGGTTGCTGCTGGTGCTTGTGTTTACACTCAGAAGCTTGTGGACATGGATGTCCCTGGTTCCAAGAAGCTCTTGGAAAGCCTTGGTCGTGCCAAGATTTGGGGTGTTTTTGCTAGACCCTAA 1659 0.5744 MKVTESEAEAEGVTVRECIEVMSSLLSEIPSMESFKGKWSLIGATLTHLQTHLSDSDFPASNPLSLDLLRSLSQTLHHALSLAQHCHSPNPPHGKLKTQSDLHSLLDTLNRHLHDSTILSRTHIDNAAALSTNPRDSLRSQSRNLITRLQIGSPDSRNSAMDSLLSLLHQDDKNVVIAVAQGVVPVLVRTLDHSTSSESKEKAVAAIARISTVDTSKPVLAAEGLLLLNHLLRVLDSGSGFAKEKACIALQALSYSKENARAIGSRGGISSLLEICQAGTPGSQASAAGVLRNLSRFAEIKENLVEENAVFVLLGLASSGTALAQENAIACLCGLVSEDQSLKLSVVREGALESLKNFWESGRSPDVAIEFLGQLASCSRVADVVVSDGFVVPRVVAALGSGVMAVRVAAGKAVYAMCLESARARKELGECGGVSPLIKMLVDGKSTEEKEAGAKALSVMLMHAGNRRVFRKDERGIVSAVQLLNPSVVGLDKRYPVSLLESLVHSKKCKKQMVAAGACVYTQKLVDMDVPGSKKLLESLGRAKIWGVFARP 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02879 552 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 550 - -
Adu03g02879 552 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 1 550 - -
Adu03g02879 552 SUPERFAMILY ARM repeat 138 478 IPR016024 -
Adu03g02879 552 Gene3D - 132 366 IPR011989 -
Adu03g02879 552 Gene3D - 367 539 IPR011989 -
Adu03g02879 552 SMART arm_5 297 337 IPR000225 GO:0005515
Adu03g02879 552 SMART arm_5 421 462 IPR000225 GO:0005515
Adu03g02879 552 SMART arm_5 171 212 IPR000225 GO:0005515
Adu03g02879 552 SMART arm_5 256 296 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02879 Adu-Chr3 109399246 109400904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02879 138 410 U-box Gene Family AT2G23140 30.797 1.40e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02879 - - pvu:PHAVU_009G163700g 640.958