Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02878 ATGGATAGCAGCCAACATGAAAATGGTAGGCATAACGTGGACTACTACAGAGGAGCACATTCCCTGTGGAATATGGATTCCCAGCATCAAGTAAAGGAGCCAAATGCATTAGTCATGAATAAAAAAATAAGGTCCATTATGGCTGAAAGGCAGGCTGCCATTCTAGAACACGAACTAGAGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTCGTGATTTGGCCCTTCGACAAAGGGATGAAGCACTTGCGCAAAGGGATAATGCCCTAAAGGAACGGGATAATGCCCTCACAGCACTTAAAAGTCAGAACATTTTCAAGTCAGGTGATGGAGCTCAACGTGGATCAAAGCGGATGCGCCAAACTGCATGCAGCCCAAAGGATATATCCAGAAGGGATGTCTCTCCAATGACGGCTAAAGTTTCTGAAGCTGTCAAATCTAATCAAGCTAAAAGAATGAAGGATGAAAATGTAATTAATTCTAAGGTATCAAAACCACATAGCAAGGCAAAGAAAATGGGCGAGGATTTAAATAGGCAGGCAGCTTCTGAAGGGATAAAGTTCAAATCTGAATGGGATATGCAGGATGTTGGCTTGAATTTGGTTGCATTTGATGAAACTATCATGCCTGTCCCAATATGCACCTGCACTGGAGTACCCCGGCAGTGCTACAAATGGGGGAATGGCGGATGGCAGTCTTCTTGTTGTACCACGACGTTGTCAGTGTATCCACTGCCACAGCTTCCAAACAAGCGCCACGCCCGCATTGGGGGACGAAAGATGAGTGGGAGTGTCTTTACAAGATTGCTTAGTAGGTTTGCTTCGCAAGGTCATGACTTATCTACACCATTGGATCTTAAGAACTACTGGGCTAGACACGGAACAAATCGCAAGATTACAAGCCAAGGTTGCAGTTTGGGTATGCAAGGTGTAATAACCACTTAG 948 0.4483 MDSSQHENGRHNVDYYRGAHSLWNMDSQHQVKEPNALVMNKKIRSIMAERQAAILEHELEAAISEKNEALAARDLALRQRDEALAQRDNALKERDNALTALKSQNIFKSGDGAQRGSKRMRQTACSPKDISRRDVSPMTAKVSEAVKSNQAKRMKDENVINSKVSKPHSKAKKMGEDLNRQAASEGIKFKSEWDMQDVGLNLVAFDETIMPVPICTCTGVPRQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFASQGHDLSTPLDLKNYWARHGTNRKITSQGCSLGMQGVITT 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02878 315 PANTHER PROTEIN BASIC PENTACYSTEINE4 2 301 - -
Adu03g02878 315 PANTHER - 2 301 IPR010409 -
Adu03g02878 315 Coils Coil 52 93 - -
Adu03g02878 315 Pfam GAGA binding protein-like family 10 301 IPR010409 -
Adu03g02878 315 SMART GAGA_bind_2 1 303 IPR010409 -
Adu03g02878 315 MobiDBLite consensus disorder prediction 108 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02878 Adu-Chr3 109249387 109252291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02878 2 301 BBR or BPC Transcription factor family AT2G21240 56.954 1.13e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Adu03g02878 GAGA_bind 3.7e-90 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02878 - - gmx:100813103 458.759