Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02876 ATGGGCTGCGCGCTCCCAAAGCCGGCGCGATCCCGACCAAATCCCACTGCGCCTCCAGAGAGGCAAGGGAACAACCAACCCAGCAATGTTCACGGCTACATTCCGACCCAACAGGGTTGGCCGCCGTGGTTGATGGAGGTTGTCGGCGACGCCATCCAAGACTGGACTCCTCGCCGCGCCAACACCTTCGAAAAGCTTTCTAAGATTGGGCAAGGGACTTATAGCAATGTGTACAAAGCCAGAGACCTAGTGAGTGGAAAGATAGTGGCTTTGAAGAAGGTGAGATTTGATCACTTAGAAGGAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTCCTGAAGAAGCTTGATCACCCGAATGTTGTGAAACTTGAAGGCTTGGTTACTTCAAGGATCTGTTCCAGTATCTACTTGGTGTTTGAGTACATGGACCATGATCTTGCTGGCCTTGTTGCTGGCCATGGTCTCAACTTCACTCAGCCTCAGATTAAATGCTATATGAAGCAATTACTATGTGGGCTTGAGCATTGCCACAGCAGAGGTGTATTACACCGTGATATAAAGGGCTCCAATCTGCTTATTGACAATCAAGGAATCCTTAAAATTGCTGATTTTGGACTCGCCGCTTTCTATGATTCCAAACAAACCCGTCCCATGACCAACAGAGTCGTCACTCTTTGGTATCGTCCGCCGGAGCTTCTTCTTGGAGCTACCTTCTATGGTGTTGGTATCGACCTCTGGAGTGCCGGATGCATCTTCGCGGAGCTACTTGCCGGAAAGCCTATCATGCCTGCCCGAACAGAGGTTGAGCAACTGCACAAAATATTCAAGTTATGCGGCTCTCCATCAGAGGATTACTGGAAGAAATATAGATTGCAAAATGCTACACTCTATAAGCCACACCACCAATATAAAAGATGCATCCTGCAAACTTTCAAGGATTTCCCGTCTTCTTCATTACCTCTAATTGATACTCTTCTTGCAATAGATCCCGATCATCGCGGCACTACCTCTGCAGCTCTAAATAGTCAATTCTTTAACACCGAGCCCTATGCTTGTGAACCATCATGTTTACCAATGTATCCTCCATGCAAAGAACTCGATGTAAAGCTAAGAGTCAAAGAAGCAAGAAGGCAGAAAGCTTTAAGCGGAAAAGCTGTTGCAGTGATGCTGCAACAAGAGTTAGAGCGCTTGAGTGCGCTTTGGCCATTCCAGAGATCCAAACAAATTTAG 1236 0.4717 MGCALPKPARSRPNPTAPPERQGNNQPSNVHGYIPTQQGWPPWLMEVVGDAIQDWTPRRANTFEKLSKIGQGTYSNVYKARDLVSGKIVALKKVRFDHLEGESVKFMAREILVLKKLDHPNVVKLEGLVTSRICSSIYLVFEYMDHDLAGLVAGHGLNFTQPQIKCYMKQLLCGLEHCHSRGVLHRDIKGSNLLIDNQGILKIADFGLAAFYDSKQTRPMTNRVVTLWYRPPELLLGATFYGVGIDLWSAGCIFAELLAGKPIMPARTEVEQLHKIFKLCGSPSEDYWKKYRLQNATLYKPHHQYKRCILQTFKDFPSSSLPLIDTLLAIDPDHRGTTSAALNSQFFNTEPYACEPSCLPMYPPCKELDVKLRVKEARRQKALSGKAVAVMLQQELERLSALWPFQRSKQI 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02876 411 Pfam Protein kinase domain 63 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02876 411 MobiDBLite consensus disorder prediction 17 33 - -
Adu03g02876 411 CDD STKc_CDK9_like 63 347 - -
Adu03g02876 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Adu03g02876 411 PANTHER CELL DIVISION PROTEIN KINASE 37 390 - -
Adu03g02876 411 Gene3D Transferase(Phosphotransferase) domain 1 146 387 - -
Adu03g02876 411 ProSiteProfiles Protein kinase domain profile. 63 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02876 411 PANTHER OS02G0559300 PROTEIN 37 390 - -
Adu03g02876 411 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Adu03g02876 411 SMART serkin_6 63 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02876 411 SUPERFAMILY Protein kinase-like (PK-like) 56 352 IPR011009 -
Adu03g02876 411 MobiDBLite consensus disorder prediction 1 33 - -
Adu03g02876 411 Gene3D Phosphorylase Kinase; domain 1 49 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02876 Adu-Chr3 109235624 109238070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02876 55 410 Core Cell Cycle Gene Families AT5G10270 48.387 1.60e-112 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Adu03g02876 Pkinase 8.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02876 K08819 - gmx:100789359 622.468