Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02834 ATGGCGGAACAGACGGAGAAGGCTTTCTTGAAGCAACCCAAGGTTTTCCTCTGCTCGAAGAAATCAGGGAAAGGGAAGAGGCCTGGAAAAGGAGGCAACAGGTTCTGGAAAAGCATTGGTTTAGGTTTTAAGACTCCCAGAGAGGCTATTCAAGGGACTTACATTGACAAGAAATGCCCATTCACTGGCACTGTGTCCATCCGAGGTCGCATTCTTGCAGGTACTTGCCACAGTGCCAAGATGACCAGGACTATCATCGTTCGTCGCAACTATCTTCATTTCATTAAGAAATACCAAAGGTACGAGAAGAGGCACTCAAATATCGCAGCACATATATCTCCATGCTTCCGTGTGAAGGAAGGAGATCATGTTATCATAGGGCAATGCAGGCCATTGTCAAAGACAGTGAGGAATGTGAAGACTTCTGCCAATCCCATTTCCCAGATTAGATTTAGGAACTCGCCTGTGTGA 471 0.4628 MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIQGTYIDKKCPFTGTVSIRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIAAHISPCFRVKEGDHVIIGQCRPLSKTVRNVKTSANPISQIRFRNSPV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02834 156 SUPERFAMILY Nucleic acid-binding proteins 68 137 IPR012340 -
Adu03g02834 156 PRINTS Ribosomal protein S17 family signature 131 138 IPR000266 GO:0003735|GO:0005840|GO:0006412
Adu03g02834 156 PRINTS Ribosomal protein S17 family signature 121 131 IPR000266 GO:0003735|GO:0005840|GO:0006412
Adu03g02834 156 PRINTS Ribosomal protein S17 family signature 88 111 IPR000266 GO:0003735|GO:0005840|GO:0006412
Adu03g02834 156 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 138 IPR000266 GO:0003735|GO:0005840|GO:0006412
Adu03g02834 156 ProSitePatterns Ribosomal protein S17 signature. 121 133 IPR019979 GO:0003735|GO:0005840|GO:0006412
Adu03g02834 156 PANTHER 40S RIBOSOMAL PROTEIN S11-1-RELATED 1 138 - -
Adu03g02834 156 Pfam Ribosomal protein S17 74 137 IPR000266 GO:0003735|GO:0005840|GO:0006412
Adu03g02834 156 TIGRFAM uS17_arch: ribosomal protein uS17 55 139 IPR028333 -
Adu03g02834 156 Gene3D - 1 150 - -
Adu03g02834 156 Pfam Ribosomal_S17 N-terminal 4 72 IPR032440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02834 Adu-Chr3 107001870 107003268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02834 1 137 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 92.701 3.02e-84 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02834 K02949 - pda:103721074 267.7